Gene Information

Name : SSU98_1604 (SSU98_1604)
Accession : YP_001201162.1
Strain : Streptococcus suis 98HAH33
Genome accession: NC_009443
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1515784 - 1516449 bp
Length : 666 bp
Strand : -
Note : -

DNA sequence : 
GTGGAAAAGGGTGAATATGTCGCTATTATGGGTGAGTCAGGTTCTGGTAAGTCCACCTTGCTCAATATTTTGGCAACCCT
TGATAAGCCAACGCAGGGCAAGGTCTTGCTTAACGGATTGGATACCCAATCTATCAAGAGCAAGGAAGCGGCAGCCTTTC
GTCGGGAGAAATTGGGCTTTGTCTTCCAAGATTTCAATCTCTTGGATACTCTTTCTGTCAAGGATAATGTGCTCTTGCCT
CTGGTTTTGTCTCGCTATCCGATTGATGAGATGAACAAGCGACTCGTTCATACGCTCAATAGCCTGGGAATTGCGACCTT
GCAAGACAAGATGCCCTACGAGATTTCGGGTGGTCAGCAGCAGCGAGTTGCGGTGGCGCGTGCCATCATCACCCAGCCAG
AAATTCTCTTAGCGGATGAGCCGACTGGGGCCCTCGACTCTAAATCAACGGCAACTCTTCTAGATATTTTTGAAAAAATC
AACCAAGAGGGGCAAACGATTCTGATGGTAACCCACTCGACAGTAGCAGCTAGTCGTGCCAAACGGGTTCTCTTCATCAA
GGATGGCATCCTCTACAATCAAATCTACCGAGGTGAGAGAACTAGTCAGGAAATGTATCAGTTGATTTCAGATACCTTGA
CACTTATGGCGAATCGAGGTGAGTAG

Protein sequence : 
MEKGEYVAIMGESGSGKSTLLNILATLDKPTQGKVLLNGLDTQSIKSKEAAAFRREKLGFVFQDFNLLDTLSVKDNVLLP
LVLSRYPIDEMNKRLVHTLNSLGIATLQDKMPYEISGGQQQRVAVARAIITQPEILLADEPTGALDSKSTATLLDIFEKI
NQEGQTILMVTHSTVAASRAKRVLFIKDGILYNQIYRGERTSQEMYQLISDTLTLMANRGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSU98_1604 YP_001201162.1 peptide ABC transporter ATPase NC_008702.1.4606598. Protein 6e-36 47
SSU98_1604 YP_001201162.1 peptide ABC transporter ATPase CP001581.1.gene798.p Protein 7e-36 46
SSU98_1604 YP_001201162.1 peptide ABC transporter ATPase CP001581.1.gene598.p Protein 9e-33 44
SSU98_1604 YP_001201162.1 peptide ABC transporter ATPase NC_012469.1.7686878. Protein 1e-33 44