Gene Information

Name : SSU98_1003 (SSU98_1003)
Accession : YP_001200561.1
Strain : Streptococcus suis 98HAH33
Genome accession: NC_009443
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1937
EC number : -
Position : 966675 - 966935 bp
Length : 261 bp
Strand : -
Note : -

DNA sequence :

ATGAATACTGATAAGAAAAAGATGATAAACCGTTTGAAACGGGCCGAAGGTCAGCTCAGAGGCATTCAGAAAATGATTGA
AGAAGATCAGGAATGTATTGATATTGTAACTCAGTTGAGTGCTGTTCGTTCCAGCATTAATAGTATGATGGGAATGGTTA
TTGCTCAGAAGGTACAAGATTGTATCACTCATCCATCTGAAAACCCTGAAGAACAAGAAGCTCGTCTTGCTCAAGCTATC
AATTTAATCATAAAAAAATAG

Protein sequence :

MNTDKKKMINRLKRAEGQLRGIQKMIEEDQECIDIVTQLSAVRSSINSMMGMVIAQKVQDCITHPSENPEEQEARLAQAI
NLIIKK

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
SACOL0048	YP_184958.1	hypothetical protein	Not tested	Type-I SCCmec	Protein	6e-16	45
SAV0048	NP_370572.1	hypothetical protein	Not tested	Type-II SCCmec	Protein	8e-16	45
unnamed	BAC57484.1	hypothetical protein	Not tested	Type-IIIinv SCCmec	Protein	5e-16	45
SA0045	NP_373285.1	hypothetical protein	Not tested	Type-II SCCmec	Protein	8e-16	45
unnamed	BAA82210.2	-	Not tested	Type-II SCCmec	Protein	5e-16	45
SERP2514	YP_190056.1	hypothetical protein	Not tested	Type-II SCCmec	Protein	8e-16	45
unnamed	BAB47614.1	hypothetical protein	Not tested	Type-III SCCmec	Protein	5e-16	45
SAR0047	YP_039520.1	hypothetical protein	Not tested	Type-II SCCmec	Protein	7e-16	45
unnamed	BAA94324.1	hypothetical protein	Not tested	Type-I SCCmec	Protein	5e-15	44
SAPIG0063	YP_005732873.1	conserved protein YrkD	Not tested	Type-V SCCmec	Protein	9e-16	44
unnamed	BAB83476.1	-	Not tested	SCC 12263	Protein	1e-14	42
unnamed	BAA82170.2	-	Not tested	Type-II SCCmec	Protein	6e-15	42
unnamed	BAA86632.1	hypothetical protein	Not tested	Type-I SCCmec	Protein	4e-15	42