Gene Information

Name : SSU98_0954 (SSU98_0954)
Accession : YP_001200512.1
Strain : Streptococcus suis 98HAH33
Genome accession: NC_009443
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 919263 - 920177 bp
Length : 915 bp
Strand : -
Note : -

DNA sequence :
ATGGATATACATTTAAATCATATAAGTAAGAAATATGGTAATCGAATCATTTTAAACGATGTCACTATTAGGATTCCTTC
AGGGAAAATTTATGGGTTTATTGGTGCTAATGGAGCTGGTAAAACTACAACGATGAAAATCCTTACTGGATTACTACCTG
CTACAAAAGGTAACATATACTTTGACGGTGTAAGTCTTAACGACTTAAAAAATCAGGAGTCAATAATAGGAGCTTTTATT
AGTACACCAAGTTACTATAAAAACTTAACAGCTTATGAAAACTTAGCTATTATACAAGAAGTTCTCAAAAAACCGCAAGA
AGAAATTGATCGAGTTTTGAATCTGGTGGGCCTAAGTGAGGTTCGCAATAAAGTTGTGTCTTCGTTCTCATTTGGTATGA
AACAACGTCTTGGTTTAGCATTTGCTTTTTTAAATAATCCAGATATATTGGTATTAGATGAACCTACGAATGGATTAGAT
CCGAAAGGAATTGTTGAAATCAGAGAACTCTTATACAGACTAGCTAAAGAAGAAGGAAAAACGATTTTTATATCAAGTCA
CCATATTAGTGAAATAGAAACGATTGCAGATATGGTCGGTATAATACATGACGGTGAGCTTATTTTTGAGGGAACACTCT
CTGAACTTTATAATAAAAGGGACAGCTCTTATCTTTTTGAAGTCGCAAATCCAGATGTTTTTGAACATATTTTGAAAGTT
CGAGATATCTCATTTATTCGAAAAGAATCACATTTTGAAATAAATTCTTACAAAAAAGATATACCAAATTTAATAAAATT
CATTGTACAAGAAGGAATCGATATTTTGGAGGTTTCACCAAATAAAAACCTAGAAAGAATCTTCTTAGACTTAACGAAAG
GAGATAAAGTGTATGGTCACATTGATAAAAAATGA

Protein sequence :
MDIHLNHISKKYGNRIILNDVTIRIPSGKIYGFIGANGAGKTTTMKILTGLLPATKGNIYFDGVSLNDLKNQESIIGAFI
STPSYYKNLTAYENLAIIQEVLKKPQEEIDRVLNLVGLSEVRNKVVSSFSFGMKQRLGLAFAFLNNPDILVLDEPTNGLD
PKGIVEIRELLYRLAKEEGKTIFISSHHISEIETIADMVGIIHDGELIFEGTLSELYNKRDSSYLFEVANPDVFEHILKV
RDISFIRKESHFEINSYKKDIPNLIKFIVQEGIDILEVSPNKNLERIFLDLTKGDKVYGHIDKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0946 YP_001198312.1 hypothetical protein Not tested 89K Protein 4e-131 100
SSU98_0954 YP_001200512.1 hypothetical protein Not tested 89K Protein 4e-131 100
cdd4 CAA63569.1 - Not tested PaLoc Protein 5e-43 42
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 5e-38 41
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 9e-32 41
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 7e-32 41