Gene Information

Name : SSU05_0650 (SSU05_0650)
Accession : YP_001198016.1
Strain : Streptococcus suis 05ZYH33
Genome accession: NC_009442
Putative virulence/resistance : Virulence
Product : cobalamin/Fe3+-siderophores ABC transporter ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 632284 - 632883 bp
Length : 600 bp
Strand : -
Note : -

DNA sequence : 
ATGGACAAGCCATTTCACAACTGCCAACCGAAAGAAGTTGCAAAAAAATTGGCCCTGCTCCCTCAGGTCTTAGAAGCGAC
AGAAGGGATTTCCGTTTATGAACTGGTCTCCTATGGTCGCTTTCCGCATCAAAATGGGCTGGGACATCTCACTGATCAGG
ATAGAGAGAAAATCAACTGGGCCTTGGAAGTCACCCGGACCGCTCCCTACGCTAGGTTACCAGTTGATGATTTATCAGGT
GGTCAGAGGCAACGGGTTTGGATTGCGATGGCACTTGCCCAAGATACGGATACCATTTTCTTAGATGAACCAACAACCTA
TCTTGATCTCAATCATCAATTGGAAGTCTTAGAACTTTTAAAAGAACTGAATCAAAGCCGACAGAAAACCATTGTGATGG
TCCTTCACGATGTCAATTTATCAGCTCGATTTTCAGATTATATGATTGCCATGAAAGAGGGAGATATTCGCTACCATGGA
TCTGTGTCCAATATGATGACAACTGAGATACTTAGGGACATTTTTAGCATTGAACCTCAATTGATGCAGGTTGCTGGTCA
AGATTACCCTATTTTGCTAACTTACGATTTAAAAAAATAA

Protein sequence : 
MDKPFHNCQPKEVAKKLALLPQVLEATEGISVYELVSYGRFPHQNGLGHLTDQDREKINWALEVTRTAPYARLPVDDLSG
GQRQRVWIAMALAQDTDTIFLDEPTTYLDLNHQLEVLELLKELNQSRQKTIVMVLHDVNLSARFSDYMIAMKEGDIRYHG
SVSNMMTTEILRDIFSIEPQLMQVAGQDYPILLTYDLKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-36 44
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-36 43
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-36 43
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-31 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSU05_0650 YP_001198016.1 cobalamin/Fe3+-siderophores ABC transporter ATPase BAC0164 Protein 6e-32 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSU05_0650 YP_001198016.1 cobalamin/Fe3+-siderophores ABC transporter ATPase VFG1042 Protein 6e-32 43