Gene Information

Name : SSU05_2085 (SSU05_2085)
Accession : YP_001199451.1
Strain : Streptococcus suis 05ZYH33
Genome accession: NC_009442
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1988809 - 1989579 bp
Length : 771 bp
Strand : -
Note : unknown pir||T45470

DNA sequence : 
ATGTCAGCAATCATTGAATTAAAAGATGTCAATTTAGCATATACAGCCAGCCAGACCATGGCTTTAGAAGATGTCAATTT
GGTGATTCCCAGAGGGAGTCGGACGGCTATTGTTGGACCAAATGGTGCTGGGAAGTCCAGTCTATTCAAGGTCATTTTGG
GGTTGGAAAAACCTGACACAGGGCAGGTTCGCTTGCTTGGTCAGGAGGCAGGTCTAGAGAGGTTGATTGCTCAAAAAGTA
GCCTATATTCCCCAATCCAGTCAAGTAAATTGGCAATTTCCTGCAACAGTCTTTGAAATTGTTCTGATGGGACGCTTCGC
TCATAGTAAGGGAATGTTTAGAAGACCGACTAAGGCTGATAGACAGATTGTTGAGCAGGCTCTAGAACGGTTAAAAATTG
CGGATTTACGCCATCGTCAGATTGATCAGCTTTCAGGTGGGCAGCGTCAGCGGGTATTTTTAGCGAGAGCCCTGGCACAG
GAAGCAGAATTGTATCTTATGGATGAGCCTCTAGCAGGGATTGATCAGGCAACAGAAATCATGATCATGGATATGCTCAA
GGAGTTCCAATGTGAAGGGAAAACTTCCATTGTCATTCATCATGACTTAACGACGCTGGATGCCTACTTTGATCACCTTG
TCTGGCTTCATAAGCATGTGATTGACTCTGGTCCGATGGATGAGACTTTGACAAGCGAGAATTATCAGGCGACCTACGGC
ATAGGAAATGGGTTGTTTCTAGGAAATGCCAAAGGAGGCAGTCATGTTTGA

Protein sequence : 
MSAIIELKDVNLAYTASQTMALEDVNLVIPRGSRTAIVGPNGAGKSSLFKVILGLEKPDTGQVRLLGQEAGLERLIAQKV
AYIPQSSQVNWQFPATVFEIVLMGRFAHSKGMFRRPTKADRQIVEQALERLKIADLRHRQIDQLSGGQRQRVFLARALAQ
EAELYLMDEPLAGIDQATEIMIMDMLKEFQCEGKTSIVIHHDLTTLDAYFDHLVWLHKHVIDSGPMDETLTSENYQATYG
IGNGLFLGNAKGGSHV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-42 41
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 9e-43 41
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-42 41
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-42 41
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-42 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSU05_2085 YP_001199451.1 ABC transporter ATP-binding protein BAC0400 Protein 2e-47 46
SSU05_2085 YP_001199451.1 ABC transporter ATP-binding protein BAC0350 Protein 5e-43 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSU05_2085 YP_001199451.1 ABC transporter ATP-binding protein VFG0526 Protein 5e-43 41