Gene Information

Name : SSU05_1071 (SSU05_1071)
Accession : YP_001198437.1
Strain : Streptococcus suis 05ZYH33
Genome accession: NC_009442
Putative virulence/resistance : Virulence
Product : DNA repair protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2003
EC number : -
Position : 1040676 - 1041029 bp
Length : 354 bp
Strand : -
Note : -

DNA sequence : 
TTGGGACGTAAGATGATTCATGAAATCGGGCATAAGAAGCAGGAGCATCTAGTTGCACTTTATCTCAATACACAGAACCA
GATTATCAGTCAAAAAACGATTTTTATTGGGAGTGTTAATCGTAGCATTGCAGAACCACGTGAAATTTTGCATTACGCAG
TAAAATGTATGGCAACATCGATTATCATCGTTCATAACCACCCGTCGGGTTCAGTACAACCTAGTAGGAATGATTTGCTA
TTTACGGAGAATTTAAAAGAGTCCTGCGAAAAGCTAGGACTGGTATTATTAGATCATTTAATTGTTGGAAATAAGGATTA
CTATTCTTTTAGAGAAGAAAGTGAGTTATTTTAA

Protein sequence : 
MGRKMIHEIGHKKQEHLVALYLNTQNQIISQKTIFIGSVNRSIAEPREILHYAVKCMATSIIIVHNHPSGSVQPSRNDLL
FTENLKESCEKLGLVLLDHLIVGNKDYYSFREESELF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1217 CAD33787.1 Z1217 protein Not tested PAI I 536 Protein 2e-14 42
Z1657 NP_287160.1 RadC family DNA repair protein Not tested TAI Protein 5e-14 42
Z1217 NP_286752.1 RadC family DNA repair protein Not tested TAI Protein 3e-14 42
unnamed CAD42098.1 hypothetical protein Not tested PAI II 536 Protein 3e-14 42
unnamed CAD66203.1 hypothetical protein Not tested PAI III 536 Protein 3e-14 42
yeeS YP_854323.1 radC-like protein YeeS Not tested PAI I APEC-O1 Protein 9e-14 41
c5152 NP_757000.1 radC-like protein yeeS Not tested PAI II CFT073 Protein 9e-14 41
yeeS AAZ04458.1 putative RadC-like protein Not tested PAI I APEC-O1 Protein 6e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSU05_1071 YP_001198437.1 DNA repair protein VFG1528 Protein 8e-15 42
SSU05_1071 YP_001198437.1 DNA repair protein VFG1678 Protein 1e-14 42
SSU05_1071 YP_001198437.1 DNA repair protein VFG1617 Protein 1e-14 42