Gene Information

Name : SSU05_0973 (SSU05_0973)
Accession : YP_001198339.1
Strain : Streptococcus suis 05ZYH33
Genome accession: NC_009442
Putative virulence/resistance : Virulence
Product : Type IV secretory pathway, VirD4 component
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3505
EC number : -
Position : 955109 - 956926 bp
Length : 1818 bp
Strand : -
Note : -

DNA sequence :
ATGTATTCAAGACGAAAAGCATTTGTCTTTGGTCTCTTGGGTCTCGCCTTTGGCTATTTCTGCCATCGTCTAACTCTACT
CTATGATAGTTTAACCAATGCCCCACCTATGGAACGATTTGCCTACCTCTTAGGAGAGGGGTTAAATCAGGTTTTCAATC
CTTTATGGCTTTTTGCTTTTACTCAAAAATCTCTTCTTGCCTTTATCCTTGGGGTTCTAACGATGACACTAGTCTATCTT
TATGTATCGACAGGACAGAAGGTCTATCGAGAAGGGGAAGAATACGGTTCTGCACGATTTGGAACCAGTAAGGAAAAGCG
GAACTTTTACAGTAAGAATCCTTTCAATGACACGATTTTGGCTCGTGATGTTCGTCTAACCTTGTTGGAAAAGAAGAAGC
CCCTGTTTGACCGAAATAAAAACTTGATTGTTATTGGGGGTTCTGGGGCAGGCAAGACCTTTCGATTTGTTAAACCCAAT
CTTATCCAACTTAATTGTTCCAATATTGTCGTAGATCCTAAAGACCATTTGGCTGAGAAGACAGGTAAACTCTTTTTAGA
AAACGGTTATCAGGTCAAGGTTTTAGACTTGGTTAATATGACCAATTCAGACGGTTTTAATCCCTTTCGTTATGTAGAAA
CAGAGAATGATTTGAACCGCATGTTAACGGTCTATTTTAACAATACCCGTGGGTCTGGTTCTCGCAGTGATCCATTTTGG
GACGAGGCTTCCATGACATTGGTGAGAGCTATTGCCTCTTATTTGGTGGATTTTTACAATCCTCCAGGAAGTTCCAAGCA
AGAGCAGGAAGCAAGACGTAAGCGTGGCCGTTATCCAGCCTTTTCTGAGATTGGGAAACTCATCAAACTCTTATCAAAGG
GAGACAATCAGGACAAAAGTGTTCTTGAAGTCCTGTTTGAAGACTATGCTAAGAAATATGGTCATGAGAACTTTACCATG
AGAAACTGGGCGGATTTTCAGAACTACAAGGACAAGACCTTGGATTCGGTCATTGCTGTGACGACCGCTAAGTTTGCACT
CTTTAATATCCAATCAGTGATTGATTTGACGCAAAGAGACACTATGGATTTGAAAACGTGGGGCACTCAAAAGACCATGG
TCTATCTTGTTATTCCAGACAATGATACGACCTTTCGTTTCCTATCTGCTTTATTTTTTTCTACAGTTTTCTCCACTTTG
ACCAGACAGGCTGATGTTGACTTTAAAGGGCAACTGCCGATTCATGTTAGAAGCTATCTGGATGAGTTTGCGAATGTCGG
AGAAATCCCAGACTTTGCCGAACAAACCTCAACAGTTCGCTCTAGAAACATGAGTCTAGTTCCAATCTTGCAAAATATTG
CTCAACTCCAAGGACTTTATAAGGAAAAAGAGGCTTGGAAAACTATACTGGGGAACTGTGACAGCCTCCTCTATTTGGGT
GGAAATGACGAGGAAACATTCAAATTTATGAGTGGTCTATTAGGCAAACAAACCATTGATGTCAGAAGTACCAGTCGTTC
TTTTGGGCAGACTGGCTCAAGTTCTACCTCTCACCAGAAAATTGCCCGTGACTTGATGACGGCTGATGAAGTCGGGAATA
TGAAACGAGATGAGTGTCTTGTACGCATTGCAGGGGTTCCTGTTTTTCGAACCAAGAAATATTTTCCGCTCAAACATAAG
AATTGGAAATGGCTTGCGGATAAGGAAACCGATGAACGCTGGTGGCACTATCATATCAATCCCCTAACCGCTGAGGAAGA
GGTAGATTTGTCAGGCCATAAAATAAGAGATTTAAGCACAGAAACGACACTACATTAA

Protein sequence :
MYSRRKAFVFGLLGLAFGYFCHRLTLLYDSLTNAPPMERFAYLLGEGLNQVFNPLWLFAFTQKSLLAFILGVLTMTLVYL
YVSTGQKVYREGEEYGSARFGTSKEKRNFYSKNPFNDTILARDVRLTLLEKKKPLFDRNKNLIVIGGSGAGKTFRFVKPN
LIQLNCSNIVVDPKDHLAEKTGKLFLENGYQVKVLDLVNMTNSDGFNPFRYVETENDLNRMLTVYFNNTRGSGSRSDPFW
DEASMTLVRAIASYLVDFYNPPGSSKQEQEARRKRGRYPAFSEIGKLIKLLSKGDNQDKSVLEVLFEDYAKKYGHENFTM
RNWADFQNYKDKTLDSVIAVTTAKFALFNIQSVIDLTQRDTMDLKTWGTQKTMVYLVIPDNDTTFRFLSALFFSTVFSTL
TRQADVDFKGQLPIHVRSYLDEFANVGEIPDFAEQTSTVRSRNMSLVPILQNIAQLQGLYKEKEAWKTILGNCDSLLYLG
GNDEETFKFMSGLLGKQTIDVRSTSRSFGQTGSSSTSHQKIARDLMTADEVGNMKRDECLVRIAGVPVFRTKKYFPLKHK
NWKWLADKETDERWWHYHINPLTAEEEVDLSGHKIRDLSTETTLH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0973 YP_001198339.1 Type IV secretory pathway, VirD4 component Virulence 89K Protein 0.0 100
SSU98_0987 YP_001200545.1 Type IV secretory pathway, VirD4 component Virulence 89K Protein 0.0 100
traG YP_006309931.1 TraG/TraD family protein Not tested FWisland_1 Protein 0.0 77