|
Name : SSU05_0953 (SSU05_0953) Accession : YP_001198319.1 Strain : Streptococcus suis 05ZYH33 Genome accession: NC_009442 Putative virulence/resistance : Unknown Product : DNA recombinase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 924880 - 926442 bp Length : 1563 bp Strand : + Note : - DNA sequence : GTGACAGAGAAAAATATAATGGTTATTCCTGCTCGTAAAAGAGTAGGAAGTACAGCCGCAAAAGAAAAGATAAAGAAACT TCGTGTTGCTGCCTATTGCCGTGTTTCTACAGAAACAGAAGAACAAAATTCTAGCTATGAGGTTCAGGTCTCACACTATA CAGAGTTTATAAAGAAAAATAATGAATGGGAGTTTGCTGGCATCTTTGCAGATGATGGTATCTCTGGTACGAACACTAAA AAGCGTGACGAATTTAATCGCATGATTGCAGAGTGTATGGACGGTAACATCGACATGGTTATTACAAAATCCATCAGCCG ATTTGCGCGTAACACCCTAGACTGCCTTCAATACATTAGACAGCTCAAGGATAAGAACATATCAGTTTATTTTGAGAAAG AGAACATCAACACCACGGATGCCAAAGGTGAGGTTTTGCTGACTATTATGGCATCTTTGGCACAGCAGGAAAGCCAGAGC CTTTCACAAAACGTTAAGCTTGGGCTACAGTACCGATACCAACAAGGAAAGGTGCAGGTCAACCATAAGCGATTTATGGG CTACACGAAAGATGAAGATGGAAATTTAACTATTGTCCCCGAAGAAGCTGAGATTATCAAACGCATCTACCGAGAATACC TTGAGGGTCAGAGTCTAGTGGGCATTGGTCGAGCCCTTGAAAAGGATGGTATTTTAACAGCAGCGGGAAAACCAAGATGG CGACCAGAATCAGTTAAGAAGATACTTCAAAACGAAAAATACATCGGAGATGCCCTTCTGCAAAAGACTGTCACAGTAGA TTTTCTGACCAAGAAACGAGTGAAAAATGAAGGGCATGTTCCCCAATATTATGTTGAAAATAGCCATGAAGCGATTATTC CTAAAGAGTTATTTTTGCAGGCGCAAGAAGAAATTCATCGGAGAAGCAATATCTACACAGGAGAAGGCAAGAACAAAAGA ATTTACAGTAGCAAGTACGCTTTAAGTGCCATCACCTTCTGTGGAGATTGTGGCGATATTTATAGACGGGTCTATTGGAA TATCCACGGAAGAAAAGAATTTGTCTGGCGATGCGTGACTAGAATCGAGCAAGGTCCTGAAGTTTGTAAGAACCGAACCG TAAAAGAAGATGAACTTTATGGTGCAGTAATGACTGCGATTAATAAGCTACTTGCAGGTGGGAACAATATGATAAAGACA CTGGAAGAGAATATTCATGCTGTGATTGGCGAAACCACAGAATACCAAATTTCAGAGATTAACAACTCACTAGAGGAAAA ACAAAAAGAACTAATCAAGCTGGCGAACAAGGGTCAAGACTATGACCACTTAGCAGATGAGATTGATGAGCTGAGAGACA AGCGACAGATCCTTTTAGTAGAAGATGCCTCCCTCAGTGGCGAGAACGAGCGAATCAATGAGCTGATTGAATTTATCCGC AAGAACAAATTCCGCACCTTAGAATATGATGATAAGCTTGTAAGGAAGATAATCCAGAGCGTTACAGTCTATGAAGGCCA CTTCGTCATAGCCTTCAAATCTGGCATCGAAATGGAAATATGA Protein sequence : MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADDGISGTNTK KRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQS LSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRRSNIYTGEGKNKR IYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKT LEENIHAVIGETTEYQISEINNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0953 | YP_001198319.1 | DNA recombinase | Not tested | 89K | Protein | 0.0 | 100 |
| SSU98_0960 | YP_001200518.1 | DNA recombinase | Not tested | 89K | Protein | 0.0 | 100 |
| smi_1713 | YP_003446815.1 | site-specific recombinase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-160 | 64 |
