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Name : Fjoh_0847 (Fjoh_0847) Accession : YP_001193200.1 Strain : Flavobacterium johnsoniae UW101 Genome accession: NC_009441 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 958542 - 959813 bp Length : 1272 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTACAAATCGCATTTATTAGAGAAAATCAGGAGAAAGTAATCAAGGCTTTAGCAAAACGTAATATCGATGCTAAAAG CGTTGTTGAAGAGGTGGTGCAATTAGACGAGAATCGTCGTGCAGCTCAAGTGGAATTAGATAATACTTTAGCTGAATCTA ATAAATTGTCCAAAGATATAGGCGAATTAATGAAAGCAGGAGAGAAAGTTAAAGCAGCGATCTTAAAAGAAAAAACGGTT TCATTAAAAGAAAAAAGCAAAGAACTTGGCGAAAAAGCAGAAGCTTTAGCAGTTGAGTTAACAAATAAATTATACACACT TCCAAATCTTCCGGCTGATATTGTTCCTGAAGGAAAAACTCCAGATGACAATTTGAATGTTTTTGAAGAAGGTGAGATTC CGGTTTTACACGAAGGCGCACAGCCGCACTGGGAATTGGTAAAGAAATACGATATCATCGATTTTGAATTGGGTGTAAAA ATTACGGGTGCAGGTTTTCCTGTTTACAAAGGAAAAGGAGCTCGTTTACAGCGTGCTTTAATCAACTATTTTTTAGATAA AAATACAGCTGCAGGATACAACGAAGTTCAGGTGCCGCATTTGGTAAACGAAGCTTCAGGTTACGGAACCGGACAATTGC CAGATAAAGAAGGGCAGATGTACCACGCCGGAGTTGATGATTTATATTTAATTCCAACGGCTGAGGTTCCGGTTACGAAC TTGTTCCGTGATGTTATTTTAAACGAAAGCGAACTGCCAATTTTACATACGGCTTATACGCCATGTTTCCGTCGTGAAGC TGGTTCTTATGGAGCACACGTTCGCGGATTAAACCGTTTACACCAATTTGACAAAGTAGAAATCGTACGTGTAGAGCATC CGGATAATTCATACGCAGCGCTTGACGGAATGGTGGAGCATGTTAAAAACATTCTTCAGGAATTGAAATTGCCATACAGA ATTTTACGTCTTTGCGGAGGCGATATGGGTTTCACATCGGCATTGACGTATGATTTCGAAGTATTTTCTACAGCACAGGA CCGCTGGTTAGAAATTAGTTCTGTTTCTAATTTCGAAACTTTTCAGGCAAATCGTTTGAAATTGCGTTTCAAAGATAAAG ATGGTAAAAACCAATTAGCACATACATTAAACGGAAGTTCATTAGCATTGCCAAGAGTTTTAGCCGGAATTTTAGAAAAT TACCAAACACCGGAAGGAATTGTAATTCCAGAAGTTTTACGTCCTTACTGCGGATTTGATATAATTGACTAA Protein sequence : MLQIAFIRENQEKVIKALAKRNIDAKSVVEEVVQLDENRRAAQVELDNTLAESNKLSKDIGELMKAGEKVKAAILKEKTV SLKEKSKELGEKAEALAVELTNKLYTLPNLPADIVPEGKTPDDNLNVFEEGEIPVLHEGAQPHWELVKKYDIIDFELGVK ITGAGFPVYKGKGARLQRALINYFLDKNTAAGYNEVQVPHLVNEASGYGTGQLPDKEGQMYHAGVDDLYLIPTAEVPVTN LFRDVILNESELPILHTAYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRVEHPDNSYAALDGMVEHVKNILQELKLPYR ILRLCGGDMGFTSALTYDFEVFSTAQDRWLEISSVSNFETFQANRLKLRFKDKDGKNQLAHTLNGSSLALPRVLAGILEN YQTPEGIVIPEVLRPYCGFDIID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-70 | 45 |
