Gene Information

Name : Fjoh_0471 (Fjoh_0471)
Accession : YP_001192826.1
Strain : Flavobacterium johnsoniae UW101
Genome accession: NC_009441
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 488590 - 489300 bp
Length : 711 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGATTACCATCAAAAATCTTTCAAAAATTTTTAGAACAGAAGAAGTAGAAACAAAAGCTTTAAGTGAAGTTTCATTAAC
CATAAACGAAGGCGATTTTGTATCGATAATGGGGCCGTCGGGAAGCGGGAAATCTACTTTATTAAACATTATAGGACTTT
TAGACAGTGCTACTGACGGAAGTTATACCTTACTCGATCAGGAAATGGTTGGACTAAAAGAGAACCTGAAATCAAAAGCC
AGAAAAAAGAATATCGGTTTTATATTTCAGAATTTTAATTTAATAGATGAATTATCTGTTTATGACAATATCGAATTGCC
ATTGCTTTACAATAAAATTCATGCTTTTGAAAGAAAGAAAAAAGTAGAAGATATTGCCAATATATTGGGCATTTCACATC
GTTTGAAACATTTTCCGCAGCAGCTTTCAGGAGGTCAGCAGCAGCGTGTTGCGGTTGCAAGAGCTTTAATAAATAATCCT
AAAATTATTCTGGCCGATGAGCCTACAGGAAATCTGGATAGTAAAAACGGAAATGAGGTAATGGAATTATTGACAGATCT
TCATGCAAGCGGTTCTACAATTTTGATGGTTACGCATTCTGATTATGATGCTTCTTTTTCGCAGAGAACTATTTTAATGA
AAGACGGCGTTATTCTTTCAGAGAAATTAAATCACAAAAATGTTGATGTTTTGGTAACTTCTAAAAATTAG

Protein sequence : 
MITIKNLSKIFRTEEVETKALSEVSLTINEGDFVSIMGPSGSGKSTLLNIIGLLDSATDGSYTLLDQEMVGLKENLKSKA
RKKNIGFIFQNFNLIDELSVYDNIELPLLYNKIHAFERKKKVEDIANILGISHRLKHFPQQLSGGQQQRVAVARALINNP
KIILADEPTGNLDSKNGNEVMELLTDLHASGSTILMVTHSDYDASFSQRTILMKDGVILSEKLNHKNVDVLVTSKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fjoh_0471 YP_001192826.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-54 50
Fjoh_0471 YP_001192826.1 ABC transporter-like protein CP001581.1.gene598.p Protein 7e-37 48
Fjoh_0471 YP_001192826.1 ABC transporter-like protein CP001581.1.gene798.p Protein 5e-38 46
Fjoh_0471 YP_001192826.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-41 43
Fjoh_0471 YP_001192826.1 ABC transporter-like protein NC_012469.1.7686946. Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fjoh_0471 YP_001192826.1 ABC transporter-like protein VFG0869 Protein 1e-24 41