|
Name : Fjoh_4513 (Fjoh_4513) Accession : YP_001196831.1 Strain : Flavobacterium johnsoniae UW101 Genome accession: NC_009441 Putative virulence/resistance : Virulence Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : - Position : 5453881 - 5454615 bp Length : 735 bp Strand : - Note : TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase DNA sequence : ATGAAAATAATAGCGGTAATACCGGCACGATATGCCTCAACACGATTTCCTGCAAAATTGATGCAGGATTTGGGAGGTAA AACAGTAATTCTAAGAACGTATGAAGCTGCAGTTTCAACAAAATTATTTGATGATGTTTTTGTTGTAACCGATTCTGATT TGATTTTTGATGAAATTGTTTCTAATGGTGGAAAAGCCATTATGAGCATCAAAGAACACGAATCTGGAAGTGATCGAATT GCAGAGGCTGTTGCAAATCTTGATGTTGATATTGTGGTAAATGTACAAGGAGACGAGCCTTTTACAGAAGCGGGGCCTTT AGAACAGGTTTTATCTGTTTTTAAAAATGATCCAGATAAAAAGATTGATTTGGCTTCATTAATGCGTGAAATTACAAACG AAGACGAAATCAACAATCCAAATAATGTGAAGGTTGTGGTAGATCAATCGCAGTTTGCGTTGTATTTTTCAAGATCAGTA ATTCCGTATCCAAGAGAGAAAGATGCCGGAGTTCGTTATTTTCAGCATATCGGAATTTACGCTTTTAGGAAACAGGCTTT GTTAGACTTTTACAGTCTTCCAATGAAATCTTTAGAAGCTTCAGAGAAATTAGAACAGCTGCGTTATTTAGAGTTTGGAA AACGTATTAAAATGGTTGAAACAACTCATGTTGGAATTGGAATTGATACTGCTGAGGATTTAGAAAGAGCCAGAGCGATG CTTAGAGATATTTAA Protein sequence : MKIIAVIPARYASTRFPAKLMQDLGGKTVILRTYEAAVSTKLFDDVFVVTDSDLIFDEIVSNGGKAIMSIKEHESGSDRI AEAVANLDVDIVVNVQGDEPFTEAGPLEQVLSVFKNDPDKKIDLASLMREITNEDEINNPNNVKVVVDQSQFALYFSRSV IPYPREKDAGVRYFQHIGIYAFRKQALLDFYSLPMKSLEASEKLEQLRYLEFGKRIKMVETTHVGIGIDTAEDLERARAM LRDI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 2e-42 | 41 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 2e-42 | 41 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 2e-42 | 41 |
