Gene Information

Name : Fjoh_4142 (Fjoh_4142)
Accession : YP_001196469.1
Strain : Flavobacterium johnsoniae UW101
Genome accession: NC_009441
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 4976654 - 4977385 bp
Length : 732 bp
Strand : +
Note : PFAM: alanine racemase domain protein

DNA sequence :
ATGAAAGAGAATATTATTTATAATTTAAAGCAGGTTCACGATCGTATCGAAAAAGCCTGTAAAGCTTCGGGAAGAGATAC
AGCAGATGTTCAGTTATTGCTGGCAACCAAAACAGTTCCTGCCGAAAGAATACGAATTGCCATTGAAGCCGGAGAAAATT
TAATTGGCGAAAATAAAATGCAGGAATTTCGGGATAAGGATTCAGAATTAAAAGATTTGAATATCGAACGTCATTTCATT
GGTCATCTGCAGACAAATAAAGTAAAAGATGTTTTGAAATATGTAAGCTGTATTCAATCTCTTGACCGATTAAGTCTGGC
AGAAGAATTACACAAACAGCTCCAGAAAGAAAACCGGGCTATTGCTGTTTTTGTTCAAGTTAATACCTCTTTTGAAGAAA
GTAAATTCGGTCTTTCTCCAACAGAAGTAATTCCGTTTATTAAAGAAATCAGGAAATATGATACTCTAAAAATCAAAGGA
TTAATGACAATTGGTTTATTAGATGTCGAGAAAGAAAAAATGCGTCCGTCGCTTCATCTGCTTAAAGAAATAAGAGATCA
AATTTATGAGGCTGAAATTGAAGGTTTAAGCAATTTAAAACTTTCAATGGGAATGTCTCAGGATTTAGAATTGGCTATTG
CCGAAGGTTCTAATCTGGTAAGAGTGGGAACTTCTATTTTTGGAAACCGCTTTTTAGGCAAAGAAATCTGGAACGAAAAT
ATTGCAGAATAA

Protein sequence :
MKENIIYNLKQVHDRIEKACKASGRDTADVQLLLATKTVPAERIRIAIEAGENLIGENKMQEFRDKDSELKDLNIERHFI
GHLQTNKVKDVLKYVSCIQSLDRLSLAEELHKQLQKENRAIAVFVQVNTSFEESKFGLSPTEVIPFIKEIRKYDTLKIKG
LMTIGLLDVEKEKMRPSLHLLKEIRDQIYEAEIEGLSNLKLSMGMSQDLELAIAEGSNLVRVGTSIFGNRFLGKEIWNEN
IAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 5e-33 41
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 5e-33 41
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 5e-33 41
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 5e-33 41