Gene Information

Name : Fjoh_0359 (Fjoh_0359)
Accession : YP_001192714.1
Strain : Flavobacterium johnsoniae UW101
Genome accession: NC_009441
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase/dehydratase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 381390 - 382373 bp
Length : 984 bp
Strand : -
Note : PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility C-terminal domain

DNA sequence : 
ATGGAGATTTCAAATCAAAATACGATATTAATTACTGGAGGCGCAGGGTTTATTGGCTCAAATTTATCTGAGCATTTTTT
AGGTTTAGGTCATAAAGTAATTTGTTTGGATAATTTTTCTACTGGACATAGACATAATCTAAAAGATTTTATAGAAAATC
CTAATTACAAATTAATTGAAGGCGATATTAGAAATCTTGAAGATTGTACTAAAGCTGTTCAAGGAGTTGATTATGTTTTA
CATCAAGCTGCATTAGGATCTGTGCCAAGATCTATAAATGATCCGATAACAACAAATGAAGTAAATGTTTCAGGTTTTTT
AAATATGTTAGTCGCTTCAAGAGATGCAAAAATAAAACGTTTTATTTATGCTGCCAGCTCATCAACTTATGGAGATTCTG
AAGGATTGCCAAAAGTAGAAGAAGTAATTGGAAAACCTTTATCTCCATATGCTATTACAAAATATGTAAATGAACTGTAT
GCAGAAATTTTTAGCAGAACCTATGGACTAGAAACAATTGGATTACGATATTTTAATGTTTTTGGAAGGAAGCAAGACCC
AGATGGTGCTTATGCTGCAGTAATTCCAAAATTTGTTAGGCAATTAATCAATCTTGAGAGCCCTTTAATAAATGGAGACG
GTAATTATTCACGTGATTTTACATATATTGATAATGTGATTCAAATGAATGAACTGGCTATAAATACGAAAGATTCAGCT
GCAATTAATACAGTTTATAATACTGCATTTGGAGATCGAAATACATTAAATGATTTAGTGAAATATCTAAAACAATATTT
GTCAGAATTTGATCCAAATATCGCTGATGTTGAAATTAGTTATGGATTAAATAGAGTTGGAGATATTCCGCATTCATTGG
CAAGTATCGAAAAAGCAAAAAAAATGTTAGGATATAAACCAGAATTCTCTTTGCAGGATGGATTAAAAGAAGCAGTTAGT
TGGTACTGGAATAATTTAAAATAA

Protein sequence : 
MEISNQNTILITGGAGFIGSNLSEHFLGLGHKVICLDNFSTGHRHNLKDFIENPNYKLIEGDIRNLEDCTKAVQGVDYVL
HQAALGSVPRSINDPITTNEVNVSGFLNMLVASRDAKIKRFIYAASSSTYGDSEGLPKVEEVIGKPLSPYAITKYVNELY
AEIFSRTYGLETIGLRYFNVFGRKQDPDGAYAAVIPKFVRQLINLESPLINGDGNYSRDFTYIDNVIQMNELAINTKDSA
AINTVYNTAFGDRNTLNDLVKYLKQYLSEFDPNIADVEISYGLNRVGDIPHSLASIEKAKKMLGYKPEFSLQDGLKEAVS
WYWNNLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 2e-79 57
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 2e-79 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fjoh_0359 YP_001192714.1 NAD-dependent epimerase/dehydratase VFG0430 Protein 7e-80 57