Gene Information

Name : Fjoh_0356 (Fjoh_0356)
Accession : YP_001192711.1
Strain : Flavobacterium johnsoniae UW101
Genome accession: NC_009441
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : -
Position : 377834 - 379123 bp
Length : 1290 bp
Strand : -
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase

DNA sequence :
ATGAAATTGGAACAAAACATAAAAATAGCTGTTATTGGTTTAGGTTATGTTGGTTTGCCTTTAGCAAGATTATTCGCGAC
AAAATATTCAGTTATTGGGTTCGATATAAATGAAACCAGAGTTAAAAGTTTAAGTTCTGGATTTGATACAACATTAGAAG
TCGATCAAGAAACATTAAAAGCTGTTTTAGTCGATAACTCAAATAGCGAAATAGGATTATACTGTACAAACGTTCTTGAA
GATATTGCGGCTTGTAATTACTTCATTGTTACAGTTCCTACTCCAGTTGATAAAAATAATCGACCTGATTTAACACCTTT
ATATAAATCCAGTGAATCTGTAGGTAAAATATTGAAAAAAGGGGATGTTGTAATTTATGAATCTACAGTTTACCCAGGAG
TTACAGAAGAGCAATGTGTTCCAGTTTTAGAAAAAGTTTCAGGTTTAAAGTTTAATAAAGACTTTTTTGCAGGATATTCA
CCAGAAAGAATAAACCCAGGAGATAAAGAGCATACAGTAGAGAAAATTTTAAAAGTTACTTCTGGTTCAACTCCTGAAGT
AGGTTTAAAAGTTGATGCATTATATAAATCAGTTATAATTGCAGGGACTCATTTAGCGCCTTCGATAAAAGTTGCAGAAG
CGGCAAAAGTAATTGAAAACTCTCAGCGTGATATAAATATTGCTTTTGTAAATGAATTAGCTAAGATCTTCAATTTAATG
AATATCGACACACAGGAAGTATTGACTGCTGCAGCAACAAAATGGAATTTCCTGCCATTTAAACCAGGACTTGTAGGTGG
TCATTGTATTGGAGTTGATCCTTATTATTTAGCGCAAAGAGCGCAAGAATTTGGATACCATCCTGAAATAATTTTAGCAG
GTAGACGTTTGAACGACAGTATGGGGGAGTATGTAGCTTCGCAAATCGTGAAGTTAATGATCAAAAAAGGAATTTCTGTT
AATGGAGCCAGTTTATTAATGCTTGGAATTACATTTAAAGAAAACTGTCCTGATGTTAGAAATACAAAGATAGTTGATGT
AATAAAAGCATTAAAAGAATATGGAATAATAGTTACAATTTATGATCCTTTGGCGAATGTTGAAGAGGTTAAAAGAGAGT
ACAAACTAGAAACTACAAATTCTTCGCCAATAGAAAAATTTGATGCTATAGTTTTAGGAGTGTCACACAAAGAGTTTTTG
AAATTAAGTTTTTCAGAATTTCAAAAAGAAAATAGTTTATTATACGATGTTAAAGGGGTTTTGGGAACAATCGCAGATAA
CAGATTGTAA

Protein sequence :
MKLEQNIKIAVIGLGYVGLPLARLFATKYSVIGFDINETRVKSLSSGFDTTLEVDQETLKAVLVDNSNSEIGLYCTNVLE
DIAACNYFIVTVPTPVDKNNRPDLTPLYKSSESVGKILKKGDVVIYESTVYPGVTEEQCVPVLEKVSGLKFNKDFFAGYS
PERINPGDKEHTVEKILKVTSGSTPEVGLKVDALYKSVIIAGTHLAPSIKVAEAAKVIENSQRDINIAFVNELAKIFNLM
NIDTQEVLTAAATKWNFLPFKPGLVGGHCIGVDPYYLAQRAQEFGYHPEIILAGRRLNDSMGEYVASQIVKLMIKKGISV
NGASLLMLGITFKENCPDVRNTKIVDVIKALKEYGIIVTIYDPLANVEEVKREYKLETTNSSPIEKFDAIVLGVSHKEFL
KLSFSEFQKENSLLYDVKGVLGTIADNRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 3e-114 56
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 3e-114 56
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 4e-111 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fjoh_0356 YP_001192711.1 UDP-glucose/GDP-mannose dehydrogenase VFG0431 Protein 1e-114 56