Gene Information

Name : Fjoh_3422 (Fjoh_3422)
Accession : YP_001195755.1
Strain : Flavobacterium johnsoniae UW101
Genome accession: NC_009441
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 4087674 - 4090277 bp
Length : 2604 bp
Strand : -
Note : PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase

DNA sequence :
ATGAATATAAACAAGTTTACTATTAAATCGCAGGAAGCCATACAGTTGTCTCAGCAATTAGCACAACGAAACGGCCAGCA
GCAAATTGAAAATGAACACATTTTCAAAGCTATTTTTGAAGTTGATGAAAACGTTGCGCCATTCATTTTGAAGAAATTAA
ATGTAAATGTGCCTTTGTTTTTACAAATTTTAGACAGTACAATTCAGAGTTTTCCAAAAGTTTCCGGAGGCGATGTTATG
CTTTCGAGAGATGCAAATAAAGCTTTGAACGAAGCAGAAATTATTGCACAAAAAATGAACGACGAATACGTTTCGATCGA
GCATTTAATCTTGGCTATTTTTGATTCAAAAAGTAAAGTTTCTCAAATTTTAAAAGATCAGGGAGTTACAGGAAAAGGTC
TGAAAGCAGCAATCGAAGAACTTCGTAAAGGAGAGAGAGTAACTTCTGCTTCTGCCGAAGAAACCTATAATTCATTAAAT
AAATACGCTAAAAATCTAAACGAATTAGCACGTACAGGAAAATTAGATCCGGTTATTGGCCGTGATGAAGAAATTCGTCG
TGTATTACAAATTTTAACTCGTCGAACTAAAAACAACCCAATGCTTATTGGTGAACCCGGAGTTGGTAAAACCGCTATTG
CCGAAGGTTTAGCACATAGAATTGTAGATGGAGATGTTCCTGAAAACCTGAAAGATAAAATCGTTTTCTCTTTAGATATG
GGAGCTTTGATTGCCGGAGCAAAATATAAAGGAGAATTTGAAGAACGTTTAAAATCGGTTGTAAAAGAAGTTACAGCCGC
AGAAGGTGATATCGTATTGTTTATTGATGAAATTCACACGCTTGTAGGTGCAGGTGGAGGAGAAGGCGCAATGGATGCGG
CTAATATCCTGAAACCAGCTTTGGCGCGTGGAGAATTAAGAGCAATTGGTGCTACAACCTTAGACGAATATCAAAAGTAT
TTTGAAAAAGATAAAGCGCTTGAAAGACGTTTTCAAAAAGTATTAATCGATGAACCAGATACTGAAAGTGCTATTTCAAT
TTTACGTGGTATCAAAGAAAAATACGAAACGCATCATAAAGTTCAGATTAAAGACGAAGCAATTATTGCAGCTGTTGAAC
TTTCGCAAAGATATATTACCAATCGTTTTTTACCAGATAAAGCGATTGACTTAATGGACGAAGCTGCTTCTAAACTTCGT
ATGGAAATCAATTCAAAACCTGAGGAATTAGACGTTTTGGATCGTAAAATCATGCAGCTTGAAATTGAAATCGAAGCGAT
TAAACGTGAAAAAGAAGAAAGTAAGCTGAAAATTTTAGGTATGGAATTGGCCAACCTGAAAGAAGAGCGAAACGAGATCT
ATGCAAAATGGAAACAGGAAAAAGATATCGTTGACGGAATTCAGGCTGTAAAACACGAAATCGAAGACTTTAAATACGAA
GCAGAACGCGCAGAACGTGATGGTGATTATGGAAAAGTAGCTGAAATTCGTTATGGTAAAATAAAAGAAGCACAAGAACG
TCAGGAAAATTTGCAAAAGCAGTTATTGGAATTTCAATCTGGTAATTCTTTAATAAAAGAAGAAGTTACAAGAGAAGATA
TTGCAGAAGTTGTAGCAAAATGGACTGGAATTCCAGTAACAAAAATGCTTCAGACAGAGAGAGAAAAACTATTGCATCTT
GAAGATGAATTACACAAACGTGTAGTTGGGCAGGAAGAAGCGATTGAAGCCGTGAGTGATGCCGTTCGCAGAAGCCGTGC
CGGTTTGCAGGATATGAAAAAACCTGTTGGTTCATTCCTGTTTTTAGGAACAACCGGAGTTGGTAAAACGGAGCTTGCAA
AAGCCTTAGCCGAATATCTTTTCGATGACGAAAATGCGATGACTCGTATCGATATGAGTGAATACCAGGAACGTCATAGT
GTAAGCCGTTTGGTTGGTGCGCCTCCAGGATATGTAGGTTATGATGAAGGAGGTCAGTTAACAGAAGCTGTTCGTAGAAA
ACCTTATTCTGTTGTACTTTTAGACGAGATCGAAAAAGCACATCCGGATACTTTCAATATTTTATTGCAGGTTCTGGACG
AAGGACGTTTAACAGACAATAAAGGACGTCTTGCCGATTTTAGAAATACGATTATTATTATGACTTCAAATATGGGAAGT
AATATTATTCAGGAGAAATTTGAAAACCTAAAAGGAAGCGTTGAGGCAGCAACTGAAGCCGCTAAAAACGAAGTTTTAGG
ATTATTAAAGCAAACTGTTCGTCCTGAGTTTATCAACCGTATCGATGAGATTGTAATGTTTACACCGCTTACTGTAGAAA
ATATTTCAAGAATTGTAAGTTTACAGTTAAAGAGTGTTACTAAAATGCTGGCTCTGCAAGGTATTACAATGGATGCGACT
CCAGAAGCGATTGCTTATCTGGCAGATAAAGGTTACGACCCTCATTTTGGAGCGAGACCTGTAAAACGTGTAGTTCAAAG
AGAAGTCTTAAACCAATTGTCAAAAGAAATTCTGGCAGGGAATATTACAACAGATAGTATTATCTTATTAGATGCTTTTG
ATGGCAATTTGGTTTTTAGAAACCAGACTGAAGAAGCTAAATAA

Protein sequence :
MNINKFTIKSQEAIQLSQQLAQRNGQQQIENEHIFKAIFEVDENVAPFILKKLNVNVPLFLQILDSTIQSFPKVSGGDVM
LSRDANKALNEAEIIAQKMNDEYVSIEHLILAIFDSKSKVSQILKDQGVTGKGLKAAIEELRKGERVTSASAEETYNSLN
KYAKNLNELARTGKLDPVIGRDEEIRRVLQILTRRTKNNPMLIGEPGVGKTAIAEGLAHRIVDGDVPENLKDKIVFSLDM
GALIAGAKYKGEFEERLKSVVKEVTAAEGDIVLFIDEIHTLVGAGGGEGAMDAANILKPALARGELRAIGATTLDEYQKY
FEKDKALERRFQKVLIDEPDTESAISILRGIKEKYETHHKVQIKDEAIIAAVELSQRYITNRFLPDKAIDLMDEAASKLR
MEINSKPEELDVLDRKIMQLEIEIEAIKREKEESKLKILGMELANLKEERNEIYAKWKQEKDIVDGIQAVKHEIEDFKYE
AERAERDGDYGKVAEIRYGKIKEAQERQENLQKQLLEFQSGNSLIKEEVTREDIAEVVAKWTGIPVTKMLQTEREKLLHL
EDELHKRVVGQEEAIEAVSDAVRRSRAGLQDMKKPVGSFLFLGTTGVGKTELAKALAEYLFDDENAMTRIDMSEYQERHS
VSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIEKAHPDTFNILLQVLDEGRLTDNKGRLADFRNTIIIMTSNMGS
NIIQEKFENLKGSVEAATEAAKNEVLGLLKQTVRPEFINRIDEIVMFTPLTVENISRIVSLQLKSVTKMLALQGITMDAT
PEAIAYLADKGYDPHFGARPVKRVVQREVLNQLSKEILAGNITTDSIILLDAFDGNLVFRNQTEEAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 1e-99 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 9e-100 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fjoh_3422 YP_001195755.1 ATPase VFG2076 Protein 3e-114 44
Fjoh_3422 YP_001195755.1 ATPase VFG2084 Protein 3e-101 43