Gene Information

Name : Fjoh_1667 (Fjoh_1667)
Accession : YP_001194018.1
Strain : Flavobacterium johnsoniae UW101
Genome accession: NC_009441
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1935630 - 1936331 bp
Length : 702 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGATCGAAATCAAAGATTTGCACAAATCCTATAAAATGGGAAGTTCGGAGCTGCATGTGTTGAAAGGAATAAATTTTAA
TATTGCCGAAGGTGAATTAGTTGCCATTATGGGATCATCGGGATCTGGAAAATCTACGCTTCTTAACATTTTAGGAATTC
TTGACGAGGCCGACTCTGGTAGTTATATTTTAGATAAAACCCCAATTAAAAAACTGAACGAAACTCTAGCTTCAAAATAC
AGAAACAAATTTCTGGGTTTTGTTTTTCAGTCTTTCAATTTAATAAATTATAAATCTGCATTAGACAACGTTGCGATGCC
TTTGTATTATCAAGGTGTAAAGAGAAAAGAACGTTATGAAATTGCAATGAAATATCTTGAAAAAGTTGGTTTAGGATCGC
ATTCTCATCACTTGCCTAACGAACTTTCTGGAGGACAGAAACAACGTGTGGCGATTGCAAGGGCATTGGCATCTAATCCA
AAAGTTTTGCTTGCCGATGAGCCTACAGGAGCCTTAGATACTAAAACTTCTTATGAGGTTATGGAGTTAATTCAAGGAAT
TAATGACGAAGGCAAAACGATTTTAATCGTTACACACGAACCAGATATTGCCGCAATGTGCAAAAGAAATGTGGTCCTGA
AAGACGGATTAATTATCGATGATAAATTAGTAGAACAAGTTAGAGCTTCATCTTATGTTTAA

Protein sequence : 
MIEIKDLHKSYKMGSSELHVLKGINFNIAEGELVAIMGSSGSGKSTLLNILGILDEADSGSYILDKTPIKKLNETLASKY
RNKFLGFVFQSFNLINYKSALDNVAMPLYYQGVKRKERYEIAMKYLEKVGLGSHSHHLPNELSGGQKQRVAIARALASNP
KVLLADEPTGALDTKTSYEVMELIQGINDEGKTILIVTHEPDIAAMCKRNVVLKDGLIIDDKLVEQVRASSYV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-31 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fjoh_1667 YP_001194018.1 ABC transporter-like protein NC_012469.1.7686878. Protein 5e-56 56
Fjoh_1667 YP_001194018.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-40 44
Fjoh_1667 YP_001194018.1 ABC transporter-like protein CP001581.1.gene798.p Protein 8e-35 42