Gene Information

Name : Fjoh_1603 (Fjoh_1603)
Accession : YP_001193954.1
Strain : Flavobacterium johnsoniae UW101
Genome accession: NC_009441
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 1851728 - 1853551 bp
Length : 1824 bp
Strand : -
Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine

DNA sequence :
ATGACTACAGAAGAACAAATATCCAGAACCCCATTTCCAAACTCTAAAAAAGTCTATATCGACGGAGAAATTCACCCAAT
AAAAGTAGCCATGCGCGAAATTACTTTAAATGATACCAAACTTTCAAACGGAGGAATTGAAAAAAATCCACCTGTAACCG
TTTACGATACTTCCGGACCATATACTGATCCAAATGTAGAAATTGATATTAGAAAAGGATTACCACGCTTACGCGAAAAA
TGGATTCTTGACAGAAATGATGTTGAAATTTTAAGTGAAATCACATCAGATTACGGACAAAGCCGATTGAAAGATGAAAG
TCTGAATCATCTTCGATTTGAATATTTACATCAGCCAAAACGTGCTAAAAAAGGTGCAAACGTAACACAATTGTATTACG
CTAAGCAAGGTATTATTACGCCGGAAATGGAATATATCGCGATTCGTGAAAACCAGCGTATCGAACTTTTAAACGAGCAG
ACTAAAGCAATGCAATGCCAGCACAGCGGAGAGAGTTTTGGTGCGAATACACCAAAAAGCAAAATTACCCCAGAATTTGT
CCGTTCAGAAGTTGCCTGCGGGAGAGCAATTATTCCAAATAATATCAATCATCCAGAAAGCGAACCTATGATTGTGGGGC
GCAATTTCCTGGTAAAAATTAATGCCAATATCGGAAACAGTGCTGTGACTTCGAGTATTGAAGAAGAAGTTGAAAAAGCC
GTTTGGGCTTGCCGCTGGGGAGCTGATACGATTATGGATTTATCTACGGGAAAAAACATTCATGAAACCAGAGAATGGAT
TATTAGAAATTCTCCTGTTCCAATTGGCACCGTTCCAATTTATCAGGCTTTAGAAAAAGTAAAAGGAGTTGCCGAGGATT
TAACTTGGGAGATTTTCCGTGACACCTTGATTGAACAAGCAGAACAAGGCGTTTCATACTTTACAATTCACGCCGGAGTT
TTACTTCGTTATATTCATTTAACTGCAAATAGAGTTACTGGAATTGTTTCTCGCGGCGGTTCAATCATGGCAAAATGGTG
TTTGTTTCATCATAAAGAAAATTTCCTTTATACACATTTTGAAGAAATTTGTGAAATCATGAAACAATACGATGTCGCTT
TTTCTTTGGGAGACGGTTTACGTCCGGGTTCGATTGCAGATGCGAATGATGCTGCTCAATTTGCAGAATTAGAAACTTTA
GGAGAATTGACAAAAATTGCCTGGAAACATGATGTACAGGTTTTCATTGAAGGTCCGGGACACGTTCCGATGCACATGAT
CAAAGAAAACATGGAAAAACAATTAGAACATTGTCATGAGGCACCATTTTATACTTTAGGCCCATTAACTACAGATATTG
CACCGGGTTATGATCATATTACATCTGCAATTGGCGCTGCAATGATTGGCTGGTATGGCTGTGCAATGCTGTGTTATGTA
ACGCCAAAAGAACATCTGGGTTTACCGAACAAAAAAGATGTAAAAGACGGCGTGATTACCTATAAAATTTCGGCACATGC
CGCCGACTTGGCAAAAGGTCATCCGGGAGCGCAATATCGAGACAACGCTTTGAGTAAAGCTCGTTTTGAATTCCGCTGGG
AAGACCAGTTTAATTTAGCATTAGATCCTGACACTGCAAGAGAATTTCATGATGAAACACTTCCGGCAGATGGTGCAAAA
GTGGCACATTTCTGTTCGATGTGTGGACCAAAATTCTGCTCTATGAAAATTTCTCAGGAAATTAGAGATGTCGCAGCTGC
AGAAAAAGGAATGCAGGAGAAATCAGAGGAATTTATTGAACAGGGAAAAGAGATTTATATTTAG

Protein sequence :
MTTEEQISRTPFPNSKKVYIDGEIHPIKVAMREITLNDTKLSNGGIEKNPPVTVYDTSGPYTDPNVEIDIRKGLPRLREK
WILDRNDVEILSEITSDYGQSRLKDESLNHLRFEYLHQPKRAKKGANVTQLYYAKQGIITPEMEYIAIRENQRIELLNEQ
TKAMQCQHSGESFGANTPKSKITPEFVRSEVACGRAIIPNNINHPESEPMIVGRNFLVKINANIGNSAVTSSIEEEVEKA
VWACRWGADTIMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVKGVAEDLTWEIFRDTLIEQAEQGVSYFTIHAGV
LLRYIHLTANRVTGIVSRGGSIMAKWCLFHHKENFLYTHFEEICEIMKQYDVAFSLGDGLRPGSIADANDAAQFAELETL
GELTKIAWKHDVQVFIEGPGHVPMHMIKENMEKQLEHCHEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWYGCAMLCYV
TPKEHLGLPNKKDVKDGVITYKISAHAADLAKGHPGAQYRDNALSKARFEFRWEDQFNLALDPDTAREFHDETLPADGAK
VAHFCSMCGPKFCSMKISQEIRDVAAAEKGMQEKSEEFIEQGKEIYI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 76
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 76
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 70