Gene Information

Name : Fjoh_1576 (Fjoh_1576)
Accession : YP_001193927.1
Strain : Flavobacterium johnsoniae UW101
Genome accession: NC_009441
Putative virulence/resistance : Virulence
Product : small multidrug resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2076
EC number : -
Position : 1829134 - 1829466 bp
Length : 333 bp
Strand : -
Note : PFAM: small multidrug resistance protein

DNA sequence : 
ATGAAGAATTTTTTATTTTTATTCATCGCTATAATCTTCGAAATCATTGCAACTTCTGCATTAAAAAAGTCCGAAGAATT
TACCAAATTAATTCCAAGTATCATTACCGTAATTGGATATTGCGGTGCATTTTATTTTCTAAGTTTTGCCATTAGAACCA
TTCCTGTAGGGTTTGCTTACGCAATCTGGTCCGGAGTCGGGATTGTTTTAATTACTGCAATTGGCGCTATATTCTTTAAA
GAAATACCAGATTTACCCGCCATAATTGGATTAAGTTTAATTATCCTTGGCGTAGTTGTAATTAATGTTTTTTCTAAAAC
CACAGCGCATTAG

Protein sequence : 
MKNFLFLFIAIIFEIIATSALKKSEEFTKLIPSIITVIGYCGAFYFLSFAIRTIPVGFAYAIWSGVGIVLITAIGAIFFK
EIPDLPAIIGLSLIILGVVVINVFSKTTAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42068.1 hypothetical protein Not tested PAI II 536 Protein 2e-10 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fjoh_1576 YP_001193927.1 small multidrug resistance protein NC_010410.6003348.p0 Protein 7e-17 66
Fjoh_1576 YP_001193927.1 small multidrug resistance protein BAC0002 Protein 7e-17 66
Fjoh_1576 YP_001193927.1 small multidrug resistance protein CP001138.1.gene1489. Protein 8e-17 61
Fjoh_1576 YP_001193927.1 small multidrug resistance protein BAC0324 Protein 6e-15 56
Fjoh_1576 YP_001193927.1 small multidrug resistance protein NC_002695.1.913273.p Protein 2e-12 53
Fjoh_1576 YP_001193927.1 small multidrug resistance protein BAC0150 Protein 2e-12 53
Fjoh_1576 YP_001193927.1 small multidrug resistance protein CP004022.1.gene1549. Protein 7e-14 50
Fjoh_1576 YP_001193927.1 small multidrug resistance protein BAC0377 Protein 2e-12 49
Fjoh_1576 YP_001193927.1 small multidrug resistance protein BAC0321 Protein 9e-11 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fjoh_1576 YP_001193927.1 small multidrug resistance protein VFG1587 Protein 9e-11 43