Gene Information

Name : Fjoh_1330 (Fjoh_1330)
Accession : YP_001193681.1
Strain : Flavobacterium johnsoniae UW101
Genome accession: NC_009441
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1521903 - 1522610 bp
Length : 708 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGATAACGATACAAAATTTAACCAAAGTATTTAGAACCGAAGAAGTTGAAACTGCTGCGCTAAGTGGAATTAACTTAGA
GATTAAAAAAGGGGATTTCCTAACTATTATGGGACCTTCTGGATGCGGTAAATCGACTTTATTGAATATTATCGGTCTTT
TGGACGGTGCAGACGGCGGAAGTTACAAATTGCTGGATCAGGAAATGATTGGTTTAAAGGAAAAAGGAAGGGCTCAGGTT
CGCAAGGAAAATATCGGATTCATTTTTCAGAATTTTAATCTAATCGATGAGCTTTCTGTTTATGACAATATCGAACTGCC
TTTGCTTTATAACAACGTAAAAGCTTCTGAAAGAAAACAAAAAATTGAAGCTATTGCAGAAAAGCTAAATATATCACATC
GATTAAAACATTTTCCGCAGCAGCTTTCAGGAGGTCAGCAGCAAAGAGTTGCCGTTGCCAGAGCTTTGGTTAATGATCCT
AAAATTATTCTTGCCGATGAACCAACAGGAAATCTGGACAGTAAAAATGGTAATGAAGTAATGGAACTTCTAACAGATCT
GCACGCAAAAGGTGCTACAATTTTGATGGTTACCCACTCTGATTATGATGCTTCTTTTTCACAAAAAACAATTCATATGA
AAGACGGTGTTATTTTTTCTGAAAAGCTAAATCAGCGAAATGTTGATGTTTTTATGGACGCTAAATAA

Protein sequence : 
MITIQNLTKVFRTEEVETAALSGINLEIKKGDFLTIMGPSGCGKSTLLNIIGLLDGADGGSYKLLDQEMIGLKEKGRAQV
RKENIGFIFQNFNLIDELSVYDNIELPLLYNNVKASERKQKIEAIAEKLNISHRLKHFPQQLSGGQQQRVAVARALVNDP
KIILADEPTGNLDSKNGNEVMELLTDLHAKGATILMVTHSDYDASFSQKTIHMKDGVIFSEKLNQRNVDVFMDAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fjoh_1330 YP_001193681.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-53 50
Fjoh_1330 YP_001193681.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-35 44
Fjoh_1330 YP_001193681.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-35 43
Fjoh_1330 YP_001193681.1 ABC transporter-like protein NC_008702.1.4606598. Protein 4e-41 42