Gene Information

Name : Msed_1530 (Msed_1530)
Accession : YP_001191610.1
Strain : Metallosphaera sedula DSM 5348
Genome accession: NC_009440
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1493254 - 1493928 bp
Length : 675 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGGAAGTTATAAAGCTTGAGAACGTGAGCAAAATTTATGGAACCAAGGTTAAGGTTACAGCACTCAAGGACATTAACCT
TAGCATAGAAGAAGGTGAGTTTGTAGCAATAGTTGGGCCTTCTGGAAGTGGGAAAACTACCATGCTTACGATTATGGGCA
CCTTAGCTAGACCAACTACAGGTAAAGTCTATATTTATGGTCATGACACGACATCACTAAACGATGACGAACTTTCAAAG
ATAAGGAACACATACATTGGGTTTGTATTTCAGAATTATAACTTAATTGATAGGATGACTGCTCTGGAGAACGTTGAGTT
GCCCCTGGTAGCCCGTAATTTACCGAAAAAAGAGAGGAGAGAGATAGCACTAGACATACTTTCCAAGCTAGGTCTAGGGG
AACTGGCTTACAAGAAACCCACAGAACTTTCTGGTGGACAACAACAGAGAGTATCCATAGCTAGGGCCTTGGCGCAAAGC
CCAAAGATAATTCTTGCCGACGAACCAACAGCGAACCTCGATAGTAAGAGCGGTGAGGCGGTGTTAAAGACCTTTCAGCA
GGCAAATAGGGAGTTCAAGACCACTGTTGTTATCATCACACATGATCCAGACGTGGCTGCCATAGCAGGGAGAAAGGTAC
ACATTAGAGATGGTCAAATAGAGAAGATAGAGTGA

Protein sequence : 
MEVIKLENVSKIYGTKVKVTALKDINLSIEEGEFVAIVGPSGSGKTTMLTIMGTLARPTTGKVYIYGHDTTSLNDDELSK
IRNTYIGFVFQNYNLIDRMTALENVELPLVARNLPKKERREIALDILSKLGLGELAYKKPTELSGGQQQRVSIARALAQS
PKIILADEPTANLDSKSGEAVLKTFQQANREFKTTVVIITHDPDVAAIAGRKVHIRDGQIEKIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Msed_1530 YP_001191610.1 ABC transporter-like protein NC_012469.1.7686878. Protein 3e-47 47
Msed_1530 YP_001191610.1 ABC transporter-like protein CP001581.1.gene798.p Protein 7e-40 43
Msed_1530 YP_001191610.1 ABC transporter-like protein NC_008702.1.4606598. Protein 4e-36 43
Msed_1530 YP_001191610.1 ABC transporter-like protein CP001581.1.gene598.p Protein 5e-38 42