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Name : Pmen_0806 (Pmen_0806) Accession : YP_001186306.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Virulence Product : TonB-dependent receptor Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG4771 EC number : - Position : 918534 - 920765 bp Length : 2232 bp Strand : - Note : PFAM: TonB-dependent receptor; TonB-dependent receptor, plug DNA sequence : ATGTCCGCCCTCAATTCCCGTACCGCCCTGGCTAGCGCCGTTGCGCTGGCCGCCAGCTTCGGCGCCCAGGCCAACGAGCC GATCGCCCTGGGCGACGTGGTCGTCAGCGCTTCCGGCTTCGAACAGAAGATCACCGAAGCCCCCGCCAGCATCAGCGTGA TCAGGCGCGAGGAGTTGCAGCAGAAGCGCTACAGCAACCTGGCGCAGGCTCTGGGTGATGTTGAGGGCATCGATATCGGC CAGGGCACCGGCAAGACTGGCGGGCTGAACATCAGCATTCGCGGCATGCCCAGCGACTACACCCTGATCCTCATCGACGG TCGGCGCCAGAACACCGCGGGCAACGTCACGCCCAACGGCTTCAACGAAACCGCCACCAGCTTCATGCCGCCGATGTCCG CCATCGAACGCATCGAGGTGATTCGTGGGCCGATGTCGACCCTGTATGGCTCTGACGCCATGGGCGGCGTGGTCAACATC ATCACCCGCAAGGTGGCCAAGGAATGGGGAGCCAGCCTGAGCCTGGACCACACCTTCCAGGAGAACCGCGACTATGGCGC CACCAGCAGCACCAGCCTCTATGCCAGCGGCCCGCTGGTCGAAGGCCTGCTGGGCCTGGCTGTGCGCGGCAGCTTTTATG ACCGCGACGAGTCGGAGCTGCAGTTCGACAACGACAGTACCGTCAGCAAGCGTGGCGCGTCGCCGGTCGAGGGCCGCAAC GCGACCTTCGGCAGCCGCCTGACGCTGACCCCGAACGAAAGCCACGACTTCTCGCTGGATTTCGAGCGCGGCCGTCAGGT CTACAACAACGACGACTGCCAGCTGGGCAATCTCGATGGCAAGAACGGCGGCAGTGCGACCGACGGCTGCACCACCAATG CCCCCCTGCGTGCCAATGGCTACAAGGATGAACTGCGCTTCCAGCGCGATCAGTTCGCCCTCAGCCATACCGGACGTTTC AGCTTCGGTACGCTGGAAAGCAGCGTCACCCACAACACCACGGAAACCTTCGGCCGCACCATTCCCGGCAACCCGATCGG CAACTCCTACACCGGTTTCCCCTCGATCATCATCGGCGACGACCGCGAGCTGAAGTCGACCGATCTGGTCGTCGACACCA AACTGGTCGCTCCAGTGGGCGAATCGCACATCACCACCGTCGGCGCTCAGTGGTGGGACGCCAAGGTCACCGACGGCATC GCCGACGAAGATTTCCAGCAGACTTCCTGGGCGCTGTTCGCCGAAGACGAGTGGCGTCTGCGCGACAACCTGGCGCTGAC CCTGGGCGCCCGCTACGAAGATCATGAAGCCTTCGGCGGCCACATCAGCCCGCGCGCCTATCTGGTCTGGAACACCACTG ACGCCTGGACACTCAAGGGCGGCGTCAGCCGTGGCTACAAGACTCCGACACTCAATCAGCTGCACGACGGCATCAACGGT GTCACCGGCCAGGGCTCGACCATCACCATCGGCAGTCCGGACCTCGACCCGGAGATCACCACCAACACCGAAATCGGCGC GTACTACGACAACCTCGCCAACTTCAATGCCAACGTCACCCTGTTCCACAACAAGTTCAAGGACAAGATCGACGACGGCA CACCGCTGGCGAACTGTTTCTACACGGCGAACCCGAACCAGCCAGGCTGCGTGAGCTATGGCCCGGGCTTCACTCAGGAG AACTTCGCCCAGAGCGTGAACATCGGCGAGGCCGTGACCAAGGGCGTGGAAGTAGCGGGTCGCTGGCAGTTCGCACCGGC CTGGGCGCTGGCCCTCAACTACACCTACACCGACAGCGAGCAGAAGAGCGGCATCAACAAAGGCGCGCCCCTCACCAATA CGCCGGAGCACATGGCCCATGCGCGCCTGAGCTGGGCTGCCAATGACCGCCTGACCCTGTGGTTCAAGGGGGAGTATCGC GGTGAGCGCGCCCGCTTCACCGATCGTTACGACAACCTGACCGCCGCGAACAAGGCCCTTTACGATGCAGTCGGTGATCT GAAGGCTTATGAAGTCTTCCACCTCGGGGGTTCGTTCAAGGCGACCGAAAACCTGACCTTCAGCGCCACGATCTACAACC TGTTCGACAAGGACTTCACCAGCGGCAGCTACTACACCACCAACACCGGTTCCACCGCATGGGCGTCCGACTACACGCAG ATCGGCCAGTCGACCACCGGCACTCTGGAAGAAGGGCGCCGCCTCTGGCTGTCCACCGTCATCGAGTTCTGA Protein sequence : MSALNSRTALASAVALAASFGAQANEPIALGDVVVSASGFEQKITEAPASISVIRREELQQKRYSNLAQALGDVEGIDIG QGTGKTGGLNISIRGMPSDYTLILIDGRRQNTAGNVTPNGFNETATSFMPPMSAIERIEVIRGPMSTLYGSDAMGGVVNI ITRKVAKEWGASLSLDHTFQENRDYGATSSTSLYASGPLVEGLLGLAVRGSFYDRDESELQFDNDSTVSKRGASPVEGRN ATFGSRLTLTPNESHDFSLDFERGRQVYNNDDCQLGNLDGKNGGSATDGCTTNAPLRANGYKDELRFQRDQFALSHTGRF SFGTLESSVTHNTTETFGRTIPGNPIGNSYTGFPSIIIGDDRELKSTDLVVDTKLVAPVGESHITTVGAQWWDAKVTDGI ADEDFQQTSWALFAEDEWRLRDNLALTLGARYEDHEAFGGHISPRAYLVWNTTDAWTLKGGVSRGYKTPTLNQLHDGING VTGQGSTITIGSPDLDPEITTNTEIGAYYDNLANFNANVTLFHNKFKDKIDDGTPLANCFYTANPNQPGCVSYGPGFTQE NFAQSVNIGEAVTKGVEVAGRWQFAPAWALALNYTYTDSEQKSGINKGAPLTNTPEHMAHARLSWAANDRLTLWFKGEYR GERARFTDRYDNLTAANKALYDAVGDLKAYEVFHLGGSFKATENLTFSATIYNLFDKDFTSGSYYTTNTGSTAWASDYTQ IGQSTTGTLEEGRRLWLSTVIEF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| r4 | AAC61730.1 | exogenous ferric siderophore receptor R4 | Not tested | PAI I CFT073 | Protein | 2e-127 | 46 |
| unnamed | CAC39288.1 | hypothetical protein | Not tested | LPA | Protein | 3e-128 | 46 |
| iha | AAF36432.2 | adhesin | Virulence | TAI | Protein | 1e-127 | 46 |
| c3610 | NP_755485.1 | bifunctional enterobactin receptor/adhesin protein | Not tested | PAI I CFT073 | Protein | 3e-127 | 46 |
| ECUMN_3356 | YP_002414032.1 | bifunctional enterobactin receptor/adhesin protein | Virulence | Not named | Protein | 3e-127 | 46 |
| Z1178 | NP_286713.1 | bifunctional enterobactin receptor/adhesin protein | Virulence | TAI | Protein | 2e-127 | 46 |
| Z1617 | NP_287121.1 | bifunctional enterobactin receptor/adhesin protein | Not tested | TAI | Protein | 2e-127 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pmen_0806 | YP_001186306.1 | TonB-dependent receptor | VFG1731 | Protein | 1e-127 | 46 |
