Gene Information

Name : Pmen_0069 (Pmen_0069)
Accession : YP_001185575.1
Strain : Pseudomonas mendocina ymp
Genome accession: NC_009439
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 66677 - 67420 bp
Length : 744 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR

DNA sequence :
ATGCGCAAGAATCTGCTGATCACCGGTGCCAGCCGCGGCATCGGCCGTGCCACGGCCCTGCTGGCCGCCGCGGGCGGCTG
GACGGTCGGGGTGAACTATCGCAGCGACCGCGCCGCCGCCGATGAGGTGGTGGCGCAGATCGAAGCCATGGGCGGCACAG
CCGTCGCCCTGCCTGGCGACGTGGCCAATGAGCAAGAGGTGCAGCGCCTGTTCGAGGCCATGGACAGGCTCGGCCCGCTG
CACGGTCTGGTGGTCAATGCCGGCATCGTCGCACCGCCCCTGCCGCTGCTGGAGATGAGCGGCGAGCGCCTGCGGCGCAT
GTTCGACGTCAACGTGCTGGGCAGCTACCTGACCGCGCGCGAAGGCGCCCGGCGCATGGCGCGCAGTCGCGGCGGCGAAG
GTGGCTCGATGGTGCTGGTGTCTTCGGTGGCCGCCAGCCTGGGCGCGCCGTTCGAATATGTCGACTACGCCGGCGCCAAG
GGTGCCATGGACGTGCTGACCCGCGGCCTGGCCAAGGAGCTGGGCGGTGAGGGTGTACGGGTCAATGCCGTGCGGCCGGG
GCTGATCGACACCGAGATCCACGCCAGCGGCGGCCAGCCGGATCGCGCCGAGCGCCTCGGCAAGGCCACCCCGCTGGGCC
GCGCCGGCCGCGCGGAGGAGGTTGCCGAGGCCATCGTCTGGCTGCTCGATGACAAGGCCAGCTACACCACCGGTGCGCTG
ATCGATATTGCCGGCGGGCGTTGA

Protein sequence :
MRKNLLITGASRGIGRATALLAAAGGWTVGVNYRSDRAAADEVVAQIEAMGGTAVALPGDVANEQEVQRLFEAMDRLGPL
HGLVVNAGIVAPPLPLLEMSGERLRRMFDVNVLGSYLTAREGARRMARSRGGEGGSMVLVSSVAASLGAPFEYVDYAGAK
GAMDVLTRGLAKELGGEGVRVNAVRPGLIDTEIHASGGQPDRAERLGKATPLGRAGRAEEVAEAIVWLLDDKASYTTGAL
IDIAGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf29 AAO17195.1 Orf29 Not tested tcd island Protein 2e-39 50
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 9e-38 49