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Name : Pmen_0649 (Pmen_0649) Accession : YP_001186149.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 717423 - 718817 bp Length : 1395 bp Strand : + Note : unwinds double stranded DNA DNA sequence : ATGAACGACATCAGCATCCCCGAGCAATACGACCTGCAGACCGCTGCCCTGAAAGTGCCGCCGCACTCCATCGAGGCGGA GCAGGCGGTGCTGGGTGGCCTGATGCTGGACAACAACGCCTGGGAACGCGTGCTCGACGCCGTATCCGATGGCGATTTCT ATCGCCATGACCATCGCCTGATCTTTCGCGCCATCTACAAGCTGGCCGAGCGCAACGCACCCTTCGACGTCGTCACCCTG TCCGAACAGCTGGACAAGGAAGGGCAGCTTTCGCAGGTCGGCGGCCTGGCCTATCTGGGCGAGCTGGCCAAGAACACGCC GTCGGTAGCCAACATCAAGGCCTATGCGCAGATCATTCGCGAGCGCGCCACGCTGCGCCAGCTGATCGGCATCAGCAACG AGATCGCCGACAGCGCCTATGCGCCGGAAGGCCGTACCGGCGAGGAAATCCTCGACGAGGCCGAGCGCAAGATTTTCGAG ATCGCCGAGGCGCGCCCCAAGACCGGCGGTCCGGTGGGCATCAACGACATCCTGGTCAAGGCCATCGACCGTATCGACCA GCTGTTCAACAACGGTGACGCGATCACCGGCCTGTCCACCGGCTTCGATGATCTGGATGGCAAGACCAGCGGCCTGCAGC CGGCCGATCTGGTGATCGTCGCCGGTCGTCCGTCGATGGGTAAGACCACCTTCGCCATGAACCTGGTGGAAAACGCCCTG ATGCGCAGCGACAAGGCGATCCTCGTCTACTCGCTGGAAATGCCCTCGGAATCCATCGTGATTCGTATGCTGGCGTCCCT GGGGCGCATCGACCAGACCAAGGTGCGTGCCGGTCAGCTCGATGACGACGACTGGCCGCGCCTGACCAGCGCGGTCAACC TGCTCAACGACCGCAAGCTGTTTATCGACGATACCGCGGGCATTTCCCCCAGCGAGATGCGCGCGCGTACGCGGCGCCTG GCGCGCGAGCATGGCGAGATCGGCCTGATCATGGTCGACTACCTGCAGCTGATGCAGATTCCCGGCTCCAGCGGCGACAG CCGGGTCAACGAGATTTCCGAGATCTCGCGCTCGCTCAAGGCCCTGGCCAAGGAATTCAACTGCCCGGTCATCGCCCTGT CGCAGCTCAACCGCTCGCTGGAGCAGCGCCCCAACAAGCGCCCGGTGAACTCGGACCTGCGTGAATCCGGAGCGATCGAG CAGGACGCCGACATCATCATGTTCGTCTACCGCGACGAGGTCTATCACCCGGAGACCGAGTACAAGGGCGTGGCCGAGAT CATCATCGGCAAGCAGCGTAACGGCCCCATCGGCACCGTGCGTCTGGCCTTCCTCGGCAAGTATTCGCGTTTTGAGAACC TGGCGCCGGGCAGCTATCAGTTCGAGGACGAATAA Protein sequence : MNDISIPEQYDLQTAALKVPPHSIEAEQAVLGGLMLDNNAWERVLDAVSDGDFYRHDHRLIFRAIYKLAERNAPFDVVTL SEQLDKEGQLSQVGGLAYLGELAKNTPSVANIKAYAQIIRERATLRQLIGISNEIADSAYAPEGRTGEEILDEAERKIFE IAEARPKTGGPVGINDILVKAIDRIDQLFNNGDAITGLSTGFDDLDGKTSGLQPADLVIVAGRPSMGKTTFAMNLVENAL MRSDKAILVYSLEMPSESIVIRMLASLGRIDQTKVRAGQLDDDDWPRLTSAVNLLNDRKLFIDDTAGISPSEMRARTRRL AREHGEIGLIMVDYLQLMQIPGSSGDSRVNEISEISRSLKALAKEFNCPVIALSQLNRSLEQRPNKRPVNSDLRESGAIE QDADIIMFVYRDEVYHPETEYKGVAEIIIGKQRNGPIGTVRLAFLGKYSRFENLAPGSYQFEDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 7e-122 | 58 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 8e-107 | 54 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 6e-104 | 50 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 2e-104 | 50 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 5e-104 | 50 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 8e-99 | 49 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-93 | 45 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-93 | 45 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 2e-81 | 44 |
