Gene Information

Name : pbpG (Pmen_0066)
Accession : YP_001185572.1
Strain : Pseudomonas mendocina ymp
Genome accession: NC_009439
Putative virulence/resistance : Unknown
Product : D-alanyl-D-alanine endopeptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1686
EC number : 3.4.16.4
Position : 63685 - 64587 bp
Length : 903 bp
Strand : +
Note : specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7

DNA sequence :
GTGAAACTCCGATATTCGATTTTGGGCCTGCTGCTGAGCGCCGGCCTTGTTGTCTCGAACCTTCAGGCCGCGCCGGCCCA
GCCGCAACAGGAACTTGCTGCGGGCAGCGCATTGCTGATCGACCTGAAGACCGGAAAGGAACTCTATTCCAGCAATCCCG
ACCTGCGTCTGCCGGTGGCTTCGGTGACCAAGCTGATGACCGCCATGGTGGTGCTCGATGCCAAGCTGCCGCTGGACGAG
GTGCTGCCCATCACCATCCGCGACACCAAGGAGATGCAGGGCGTCTACTCGCGCGTACGCATCGGCAGCGAGATCAGCCG
GCGCGACATGCTGCATCTGGCCCTGATGTCCTCGGAGAACCGCGCCGCCGCCAGCCTGGCCCACCACTATCCCGGTGGCC
ACGTGGCGTTCGTCGCGGCGATGAACGCCAAGGCCAAGGCGCTGGGCATGCACAACAGCCATTTCGTCGAGCCCACCGGC
ATGTCCGAGCGCAACGTCGCCACCGCCCGCGACCTGGCGCTGATGATCAAGGCCACCCAGCAGTACCCGCTGATCGGCCA
GTTCAGCACCGACTCCGAGGCGACCGTCACCTTCCGCAAGCCGACCTATACCCTGGGCTTTCGCAACACCAACGCACTGG
TGCGCAAGCCCGACTGGGACATCGGCATGAGCAAGACCGGCTTTACCAACGCCGCGGGGCGCTGCCTGGTGATGCTCACC
TCGATGAACCAGCGTTCGGTGGCCTTCGTCGTGCTCGGTGCGTTCGGCAAGTACACCCATATGGCCGACGCCAACCGCCT
CAAGCGCTGGATGGAGACCGGCAAGGTGACGCCGGTGCCGGCCGCCGCGCTCAGCTACAAGCAGCAGAAGCTGACCGAAT
GGAGCATGCAGGCCGCGCAGTGA

Protein sequence :
MKLRYSILGLLLSAGLVVSNLQAAPAQPQQELAAGSALLIDLKTGKELYSSNPDLRLPVASVTKLMTAMVVLDAKLPLDE
VLPITIRDTKEMQGVYSRVRIGSEISRRDMLHLALMSSENRAAASLAHHYPGGHVAFVAAMNAKAKALGMHNSHFVEPTG
MSERNVATARDLALMIKATQQYPLIGQFSTDSEATVTFRKPTYTLGFRNTNALVRKPDWDIGMSKTGFTNAAGRCLVMLT
SMNQRSVAFVVLGAFGKYTHMADANRLKRWMETGKVTPVPAAALSYKQQKLTEWSMQAAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00303 YP_008207768.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR25 Protein 3e-39 46
BJAB0868_00307 YP_008211633.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR26 Protein 3e-39 46