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Name : Pmen_0609 (Pmen_0609) Accession : YP_001186109.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 670217 - 672100 bp Length : 1884 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAGCGCACAACAACAAAAGAACCTGAGTGAATCGGCTCAGGTCGATCAGCAGTCGGTACAACCCTTTCCCCGTTCGCA GAAGGTCTATGTCCAAGGCTCGCGCCCGGACATCCGCGTGCCGATGCGCGAAATCAGCCTGGACGTGACGCCGACCGACT TCGGTGGCGAGATCAACGCCCCGGTCACCGTCTATGACACCTCCGGCCCCTACACCGACCCGAACGTCACCATCGACGTG CGCAAGGGCCTGAGTGATGTGCGCAGCGCCTGGATCGAGGATCGCGGCGACACCGAGAAGCTGCCGGGCCTATCCTCCGA GTTCGGCCAGCGCCGTCTGAACGACGCCGAGCTGTCGGCCATGCGCTTCGCCCACGTGCGCAACCCGCGCCGGGCCCGCG CCGGGCACAACGTCAGCCAGATGCACTACGCCAAGAAAGGCATCATCACGCCGGAGATGGAGTTCGTCGCCATCCGCGAG AACATGAAGCTGGCCGAAGCCCGCGAAGCCGGCCTGCTCAATGAGCAGCACGCCGGCCACAGCTTCGGCGCCAGCATCCC GAAGGAAATCACCCCCGAGTTCGTGCGCAGCGAAGTCGCCCGCGGCCGCGCCATTATTCCGGCCAATATCAACCACGTGG AGCTGGAGCCGATGATCATCGGCCGCAACTTCCTGGTGAAGATCAACGGCAATATCGGCAACAGCGCCCTGGGCTCCTCC ATCGAGGAAGAAGTGGCCAAGCTGACCTGGGGCATCCGCTGGGGCTCGGACACGGTGATGGACCTGTCCACCGGCAAGCA TATCCACGAGACCCGCGAGTGGATCATCCGCAACTCGCCGGTGCCGATCGGCACCGTGCCGATCTACCAGGCGCTGGAGA AGGTCGGCGGCATCGCCGAGGACCTGACCTGGGAGCTGTTCCGCGACACCCTGATCGAACAGGCCGAACAGGGCGTGGAC TACTTCACCATCCACGCCGGCGTGCTGCTGCGCTACGTGCCGCTGACCGCCAAGCGCGTCACCGGCATCGTCAGCCGCGG CGGCTCGATCATGGCCAAGTGGTGCCTGGCGCATCACAAGGAAAACTTCCTCTACACCCATTTCGAAGACATCTGCGAAA TCATGAAGGCCTACGACGTGTCCTTCTCCCTGGGTGACGGCCTGCGCCCCGGCTCCATCGCCGATGCCAACGACGCCGCG CAGTTCGGCGAGCTGGAGACCCTCGGCGAGCTGACCAAGATCGCCTGGAAACACGACGTGCAGTGCATGATCGAAGGCCC CGGCCACGTGCCGATGCAGCTGATCAAGGAGAACATGGACAAGCAGCTGGAATGCTGCGACGAGGCACCGTTCTATACCC TCGGCCCGCTGACCACCGATATCGCCCCCGGCTACGACCACATCACCAGCGGCATCGGCGCAGCGATGATCGGCTGGTTC GGCTGCGCCATGCTCTGCTACGTCACGCCCAAGGAGCACCTGGGCCTGCCGAACAAGGATGACGTGAAGACCGGCATCAT CACCTACAAGATCGCGGCCCACGCAGCGGACCTGGCCAAGGGGCACCCGGGCGCGCAGATTCGCGACAACGCCCTGTCCA AGGCGCGCTTCGAGTTCCGCTGGGAAGACCAGTTCAACCTGGGCCTGGACCCGGACACCGCGCGTGCCTTCCACGACGAG ACGCTGCCCAAGGACTCGGCCAAGGTGGCGCACTTCTGCTCCATGTGCGGGCCGAAGTTCTGCTCGATGAAGATCACCCA GGAGGTGCGCGACTATGCTAAGGAACAGCGTATCGACGCCGTCGACCTGGACGCCGAACAGGGCATGCAGGCCAAGGCGG CGGAGTTCAAGGCGCAGGGCAGTCAGCTGTACCAGAAGGTCTGA Protein sequence : MSAQQQKNLSESAQVDQQSVQPFPRSQKVYVQGSRPDIRVPMREISLDVTPTDFGGEINAPVTVYDTSGPYTDPNVTIDV RKGLSDVRSAWIEDRGDTEKLPGLSSEFGQRRLNDAELSAMRFAHVRNPRRARAGHNVSQMHYAKKGIITPEMEFVAIRE NMKLAEAREAGLLNEQHAGHSFGASIPKEITPEFVRSEVARGRAIIPANINHVELEPMIIGRNFLVKINGNIGNSALGSS IEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVGGIAEDLTWELFRDTLIEQAEQGVD YFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHKENFLYTHFEDICEIMKAYDVSFSLGDGLRPGSIADANDAA QFGELETLGELTKIAWKHDVQCMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWF GCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLGLDPDTARAFHDE TLPKDSAKVAHFCSMCGPKFCSMKITQEVRDYAKEQRIDAVDLDAEQGMQAKAAEFKAQGSQLYQKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 76 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 76 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 74 |
