|
Name : cvrA; nhaP2; ycgO (Pmen_0560) Accession : YP_001186062.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Unknown Product : potassium/proton antiporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG3263 EC number : - Position : 606653 - 608398 bp Length : 1746 bp Strand : - Note : the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli DNA sequence : TTGGATGCCAGCGCCATCAACAATCTGTTCTTGATCGGCGCCTTGCTGGTAGCAGCCAGCATTCTGGTCAGCGCGTTCGG CACCCGCTTCGGCATCCCCATCCTGGTGATCTTCCTTGCGGTCGGCATGCTCGCCGGTACCGACGGACCTGGCGGCATCG TCTTCAACAACTACCCACTGGCCTATCTGGTCGGCAACCTGGCGTTGGCGGTGATCCTGCTCGACGGTGGCATGCGCACA CGGGTCTCCAGCTTCCGTGTGGCCCTGTGGCCTTCCTTGTCATTGGCGACGGTCGGAGTGGTGATAACGGCGGGTTTGAC CGGTCTGGCCGCGGCCTGGCTATTCAACCTGACGCTGCTCGAGGGCCTGCTGATCGGCGCCATCGTCGGTTCCACCGATG CCGCGGCGGTGTTCTCCCTGCTGGGCGGGCGCGGTCTCAACGAACGGGTCAGCTCCACACTGGAAATCGAGTCCGGTAGC AACGACCCGATGGCGGTGTTCCTCACCGTGACCCTGATCGCCATGCTCGCCAGCGGCCAGACCGGCTTCAGCTGGGACCT GCCGATCCAGCTGGTGCAGCAGTTCGGTCTCGGCGCTCTGCTCGGCCTGGGTGGCGGCTGGCTGCTGCTGAAACTGATCA ATCGCATGGAGCTGGCTACCGGCCTGTATCCGCTACTGGTGGTCAGCGGCGGCCTGATCATCTTTGCCATCACCACCGCC GTGGGTGGCAGCGGCATCCTCGCCATCTACCTGTGCGGCCTGCTGCTGGGCAACCGACCGATCCGTTCGCGCCACGGCAT TCTGCACATGCTCGACGGCCTCACCTGGCTGGCGCAGATCGGCATGTTCCTCGTCCTCGGCCTTCTGATCACCCCGCACG AGCTGCTGCCGATCGCCCTGCCGGCACTGGCCCTGGCACTGTGGATGATCCTCTTCGCGCGACCGCTGTCGATCTTTCTC GGCCTGCTGCCATTTCGCGCCTTCCACGACCGCGAGCGGATCTTCATCGCCTGGGTCGGTCTGCGCGGCGCGGTGCCGAT CATCCTCGCGGTATTCCCGCTGATGGCCGGCCTGCCCAATGCGCAGCTGTTCTTCAACGTCGCCTTCTTCATCGTGATCG TCTCCCTGTTGCTGCAGGGCACCAGCCTGCCGCTGGCGGCCAAGCTGATGCGCGTCACCGTACCGCCAGAGCCGGCCCCG GTGTCACGCGCCGGCCTTGAAGTGCACCCGACCAGCCAGTGGGAGCTGTTCGTCTACCGCCTTGGCGCCGAGAAATGGTG CATCGGCGCCGCCCTGCGTGAGCTGAACATGCCCGAGGGTACGCGTATCGCCGCTCTGTTCCGCGGCCGCGAGCTGCTTC ACCCATCGGGCAGCACGCGCCTGGAGGCCGGGGATCTGCTCTGCGTGATCGGCCATGAGCACGACCTGCCGGCGCTCGGC AAACTGTTCAGCCAGGCTCCCAAACGGGGCCAGGACCTGCGCTTCTTCGGCGACTTCGTACTTGAAGGTGACGCCGAACT GGCCGCCGTGGCCGCGCTCTACGGCCTCAAGCTGGACGGTCTGGACGGCCATCAGCCGCTGGGCCGTTTCATCGCCCATG AAATCGGCGGCGAGCCGGTGGTCGGCGATCAGGTGGAGTGGCAGGGTCTGACCTGGACGGTGGCCTCGATGGAAGGGAAC AAGGTGCGCAAGGTCGGCGTCAGATTCCCCGAGGGCAGTCGTCCGGGCCCCGGGCTGTTCCTCTGA Protein sequence : MDASAINNLFLIGALLVAASILVSAFGTRFGIPILVIFLAVGMLAGTDGPGGIVFNNYPLAYLVGNLALAVILLDGGMRT RVSSFRVALWPSLSLATVGVVITAGLTGLAAAWLFNLTLLEGLLIGAIVGSTDAAAVFSLLGGRGLNERVSSTLEIESGS NDPMAVFLTVTLIAMLASGQTGFSWDLPIQLVQQFGLGALLGLGGGWLLLKLINRMELATGLYPLLVVSGGLIIFAITTA VGGSGILAIYLCGLLLGNRPIRSRHGILHMLDGLTWLAQIGMFLVLGLLITPHELLPIALPALALALWMILFARPLSIFL GLLPFRAFHDRERIFIAWVGLRGAVPIILAVFPLMAGLPNAQLFFNVAFFIVIVSLLLQGTSLPLAAKLMRVTVPPEPAP VSRAGLEVHPTSQWELFVYRLGAEKWCIGAALRELNMPEGTRIAALFRGRELLHPSGSTRLEAGDLLCVIGHEHDLPALG KLFSQAPKRGQDLRFFGDFVLEGDAELAAVAALYGLKLDGLDGHQPLGRFIAHEIGGEPVVGDQVEWQGLTWTVASMEGN KVRKVGVRFPEGSRPGPGLFL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAB61290.1 | unknown | Not tested | PAI I CFT073 | Protein | 1e-155 | 69 |
| f536 | AAC61706.1 | F536 | Not tested | PAI I CFT073 | Protein | 1e-155 | 69 |
