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Name : Pmen_0482 (Pmen_0482) Accession : YP_001185984.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Virulence Product : betaine aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.8 Position : 516240 - 517712 bp Length : 1473 bp Strand : - Note : catalyzes the formation of betaine from betaine aldehyde DNA sequence : ATGCCCCGTTTCGCCGAACAGCAGCTCTACATCGGTGGCCAGTACGTCGCCGCCAGCAGCGGCCAGACCTTCGACAGCAT CAACCCGGCCACCGGTGAAGTGCTGGCCAAGGTGCAGCGTGCCAGCCAGGCCGATGTCGACCGCGCAGTGGCCAGCGCTG CCGAGGGGCAGAAGGTGTGGGCGGCGATGACCGCCATGCAGCGCTCGCGCATCCTGCGCCGCGCCGTGGACATCCTGCGC GAGCGCAACGACGAGCTGGCCGAGCTGGAAACCCTCGACACCGGCAAGCCGCTTTCCGAAACCCGCTACGTCGACATCGT CACCGGCGCCGACGTGCTGGAGTACTACGCAGGCCTGATCCCGGCCATCGAGGGCGAGCAGATCCCCCTGCGCGAATCCT CCTTCGTCTACACCCGCCGCGAACCGCTGGGCGTGGTCGCCGGTATCGGCGCGTGGAACTACCCAATCCAGATCGCCCTG TGGAAATCCGCCCCGGCCCTGGCCGCCGGCAACGCGATGATCTTCAAGCCCAGCGAAGTCACCTCGCTGACCGCGCTGAA ACTGGCCGAGATCTACACCGAGGCAGGTCTGCCCGCCGGCGTGTTCAACGTGCTCACCGGCAGCGGCCGCGAAGTCGGCC AGTGGCTGACCGAACATCCGGGTATCGAGAAGGTGTCCTTCACCGGCGGCACCGTCACCGGCAAGAAGGTGATGGCCAGC GCCTCCAGCTCCAGCCTCAAGGAAGTGACCATGGAGCTGGGCGGCAAGTCGCCGCTGATCGTGTTCGAAGACGCCGACCT CGACCGCGCCGCCGACATCGCGGTGATGGCCAACTTCTACAGCTCCGGCCAGGTGTGCACCAACGGCACCCGCGTGTTCG TGCCGCGCATGCTGCAGGCGCGCTTCGAGGCCAAGGTGCTGGAGCGGGTCAAGCGCATCCGCCTGGGCGATCCGCTGGAT GACGCCACCAACTTCGGCCCGCTGGTCAGCTACGCGCACATGGAGAGCGTGCTCGGCTACATCGAGAAAGGCCGCAGCGA GGGCGCACGCCTGCTGATCGGCGGCACGCGCGTCAGTGACGGCGATTACGCCAAGGGCGCCTACGTCGCCCCCACCGTGT TCACCGATTGCCGGGACGACATGACCATCGTGCGCGAGGAAATCTTCGGCCCGGTGATGAGCATCCTCATCTACGACAGC GAAGAGGAAGTGATCCGCCGCGCCAACGATACCGACTACGGCCTCGCCGCCGGCGTGGTGACCCGCGACCTGAACCGCGC GCACCGGGTGATCCACAAGCTGGAAGCCGGCATCTGCTGGATCAACACCTGGGGCGAATCGCCGGCCGAAATGCCGGTGG GCGGCTACAAGCAATCCGGCGTCGGCCGCGAGAACGGCCTGGTCACCCTCGGTCATTACACCCGCATCAAGTCGGTGCAG GTGGAGCTGGGCGGTTACAGCTCGGTGTTCTGA Protein sequence : MPRFAEQQLYIGGQYVAASSGQTFDSINPATGEVLAKVQRASQADVDRAVASAAEGQKVWAAMTAMQRSRILRRAVDILR ERNDELAELETLDTGKPLSETRYVDIVTGADVLEYYAGLIPAIEGEQIPLRESSFVYTRREPLGVVAGIGAWNYPIQIAL WKSAPALAAGNAMIFKPSEVTSLTALKLAEIYTEAGLPAGVFNVLTGSGREVGQWLTEHPGIEKVSFTGGTVTGKKVMAS ASSSSLKEVTMELGGKSPLIVFEDADLDRAADIAVMANFYSSGQVCTNGTRVFVPRMLQARFEAKVLERVKRIRLGDPLD DATNFGPLVSYAHMESVLGYIEKGRSEGARLLIGGTRVSDGDYAKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILIYDS EEEVIRRANDTDYGLAAGVVTRDLNRAHRVIHKLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLVTLGHYTRIKSVQ VELGGYSSVF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 1e-78 | 42 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 1e-78 | 42 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 1e-78 | 42 |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 1e-82 | 42 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 2e-78 | 42 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 3e-76 | 41 |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 2e-75 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pmen_0482 | YP_001185984.1 | betaine aldehyde dehydrogenase | VFG0082 | Protein | 1e-76 | 41 |
