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Name : Pmen_4561 (Pmen_4561) Accession : YP_001190040.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Virulence Product : two component sigma-54 specific Fis family transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 5002560 - 5003900 bp Length : 1341 bp Strand : - Note : PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase DNA sequence : ATGAGCGCTCAGGTCATAGTGGTCGACGACGAAGCGGCGATTCGCGAGGCGGTGCAGCAGTGGCTGGAGCTGTCCGGTTT TACCGTGCGCACCTGCGCCAGCGCGGCCGAAGCCCTGGCGGTGGTGGACCGCGACTTCCCCGGCATCGTCGTCAGCGATG TGCGCATGCCCGGCAGCGATGGCCTGCAACTGCTCGACAAGCTGCTGCAGGTGGACGCCGACCTGCCGGTGATCCTGGTG ACCGGCCACGGCGACGTGCCCATGGCGGTGCAGGCGCTGCGCCAGGGCGCCTACGACTTCATCGAGAAACCCTTCACCCC CGAGCGCCTGCTCGACAGCGTGCGCCGTGCGCTGGACAAGCGCCGCCTGGTCTGCGAGAACCGCCTGCTGCGTCAGCAGG TGGCGAACAAGGGGCGTATCGAAAGCCAGCTGATCGGCATTTCGCGGCCGATGGAAAGCCTGCGCCGGCAGATCCTCGAG CTGGCCGGCACCTCGGTCAACGTGCTCATTCGCGGCGAGACCGGCAGCGGCAAGGAGCGCGTGGCGCGCTGCCTGCACGA CTTCAGCCCGCGCGCCGGCAAGGCCTTCGCCGCGCTCAACTGCGCGGCGATTCCCGAGACCATCTTCGAGAGCGAGCTGT TCGGTCACGAGAGCGGCGCCTTCACCGGTGCCCAGGCGCGGCGCATCGGCCGTATCGAGCATGCCGACGGCGGTACCCTG TTCCTCGACGAGGTCGAGAGTCTGCCGTTGGCGCAGCAGGTCAAGCTCCTGCGCGTGCTGCAGGAGAAGACTCTGGAGCG CCTCGGTTCGAACAAGAGCATCCAGGTCGATCTGCGGGTGATCAGCGCGGCCAAGCCGGATCTGCTCGACGAGGTCAAGG CCGGGCGCTTCCGCGAGGACCTGGTGTATCGCCTGAACGTCGCCACCCTGCACATTCCGCCGCTGCGCGAGCGCCGCGAG GACATTCCGCTGCTGTTCGAGCACTTTGCTCGTGCCGCCGCCGAGCGTCACGGCCGCGAGGTGCCACCGCTGGCACCCAG CGAGCTGGCGCGGCTGCTCGGTCATGACTGGCCGGGCAACGTACGCGAGCTGATCAATGCCGCCGAGCGCCATGCCCTGG GGCTGTCCAGCCCGCCGCCGGCCGAGCGCTTCGCCGGTCAGGCACTGGCGCAGCAGATGGAAGCCTTCGAAGCGCAGTGC CTGCACAACGCCCTGCTGCAATGCCAGGGCAACATCGCCGCGGTGATGGAGATGCTGCAGCTGCCGCGCCGCACCCTCAA CGAGAAGATGCAGCGCCACGGTCTGGCGCGCGGTGACTACCTGCCCGGCGGCGAGGAGTAG Protein sequence : MSAQVIVVDDEAAIREAVQQWLELSGFTVRTCASAAEALAVVDRDFPGIVVSDVRMPGSDGLQLLDKLLQVDADLPVILV TGHGDVPMAVQALRQGAYDFIEKPFTPERLLDSVRRALDKRRLVCENRLLRQQVANKGRIESQLIGISRPMESLRRQILE LAGTSVNVLIRGETGSGKERVARCLHDFSPRAGKAFAALNCAAIPETIFESELFGHESGAFTGAQARRIGRIEHADGGTL FLDEVESLPLAQQVKLLRVLQEKTLERLGSNKSIQVDLRVISAAKPDLLDEVKAGRFREDLVYRLNVATLHIPPLRERRE DIPLLFEHFARAAAERHGREVPPLAPSELARLLGHDWPGNVRELINAAERHALGLSSPPPAERFAGQALAQQMEAFEAQC LHNALLQCQGNIAAVMEMLQLPRRTLNEKMQRHGLARGDYLPGGEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00300 | YP_008207765.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR25 | Protein | 4e-52 | 41 |
| BJAB0868_00304 | YP_008211630.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR26 | Protein | 4e-52 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pmen_4561 | YP_001190040.1 | two component sigma-54 specific Fis family transcriptional regulator | BAC0089 | Protein | 1e-70 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pmen_4561 | YP_001190040.1 | two component sigma-54 specific Fis family transcriptional regulator | VFG1249 | Protein | 1e-63 | 46 |
