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Name : Pmen_4451 (Pmen_4451) Accession : YP_001189930.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Unknown Product : methyl-accepting chemotaxis sensory transducer Function : - COG functional category : N : Cell motility COG ID : COG0840 EC number : - Position : 4880921 - 4882516 bp Length : 1596 bp Strand : + Note : TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein DNA sequence : ATGAAGCTCAATCTGCCGATCAGCGGCCGGCAGGTCAGCCTGCCGCCCCACTGCAACATCCTCTCCACCACCGACCTCAA GGGTACGCTGACCTACGTCAACCCGGATTTCGTCGCCATCAGCGGCTTCAGCGAAGACGAGCTTATCGGCCGCAACCACA ACCTGGTGCGCCACCCGGACATGCCGCCGGCCGCCTTCGCCCACCTGTGGCAGAGCCTGAAAGCCGGGCGCTCGTGGATG GGGCTGGTGAAGAACCGCTGCAAGAACGGCGATCACTACTGGGTCAGCGCCTACGTCACGCCCATGCGCAGGGACGGGCG CATCGTCGAATACCAGTCGGTGCGCACGGCCGCCAGCGACGCGCAGATCGCCGCGGCCGAGGCGTTGTATGCCGAACTGC GCGCCGGCCGCACGCCGCGCGTGCTGCGCCCGCCCCGCCTGAGCCTGGGCGCGCGTCTGGCCCTGATCAGCGGTCTGCTG CCAGCCTTCGCCGCGCTGACGCTGAGCCTGGCCGGCGATCTGCCCGCACTGCCGCTGGTCACCGCTGCCAGCGCCCTGGG CCTGACCCTGGGTCTGATCGTGCACCAGGCACTGCGACCGCTCGAGCGGCTGGCGACACAGGCGCGTCGGCACGCTGACA ACCCGCTCAGCCAATGGCTGTACAGCGGCCGCAACGATGCCTTCGGCGCCATCGCCTTCGCCCTGCACAGCCTGCAGGCC GAAGCCGGTGCGGTGGTCGGGCGCATCGCCGACTCGGCGCGCCAGCTCAGCGGCGAGGCCGCGCAGCTGGCCAGTGCGGT GGACCATCACAACAGCGCCACCCTGCAGCAACGCGCGCAGACCGAGCAGGTCGCCAGCGCCATGGGACAGATGACGGTGA GCGTGCAGGAGGTGGCGCACAACGCCCAGCTCAGCGCCAGCGCGGCCAGCGAGGCGGATCAGGAAAGCCAGGAAGGGCGG CAGCTGGTGGACGCCACCTGCCAAGGCATCGCCGAGCTGGCCGACGGCCTGCGCGCCAGCCATGACCAGGTCGAGCAGCT GGCGGCGCGCAGCCATGAGATCGGCCAGGTGCTAACGGTGATCGGCGATATCGCCGGGCGCACCAATCTGCTCGCGCTCA ACGCCGCCATCGAGGCTGCCCGCGCCGGCGAGGCCGGCCGCGGCTTTGCCGTGGTGGCCGAGGAAGTACGCGCGCTGGCG CAGCGCACGCAGGATTCCACCCAGCAGATCGAGCGCATCATCGGCAGCCTGCAGGCGAGCGTCGAGCAGGCGGTCGCCTG CATGGCCGGCAGCCGGCAACAGGCGCAGGCCATCGCCGCCGAGGCCCGGCAGGCGGCGCAGGCGCTGCATGGCATCACCC AGCGGGTGGGCCGGATCAGCGACATGAACATCCAGATCGCCAGTGCGGTCGAACAGCAAAGCGCGGTTGGCGACGACATC CAGCGCAACCTGCAGGGGATTCGCCAGGCTTGCACAGGCACCACCGAGGCCAGCGCGCGCAGCCACCACAGCGCCGGGCA ACTGGCCAATCTGGCCGAGCGCCTGCAGTTGCTGGTCGAACAGTTCTGGAGTCAGCGCCAGGGCCGCCCGGGATGA Protein sequence : MKLNLPISGRQVSLPPHCNILSTTDLKGTLTYVNPDFVAISGFSEDELIGRNHNLVRHPDMPPAAFAHLWQSLKAGRSWM GLVKNRCKNGDHYWVSAYVTPMRRDGRIVEYQSVRTAASDAQIAAAEALYAELRAGRTPRVLRPPRLSLGARLALISGLL PAFAALTLSLAGDLPALPLVTAASALGLTLGLIVHQALRPLERLATQARRHADNPLSQWLYSGRNDAFGAIAFALHSLQA EAGAVVGRIADSARQLSGEAAQLASAVDHHNSATLQQRAQTEQVASAMGQMTVSVQEVAHNAQLSASAASEADQESQEGR QLVDATCQGIAELADGLRASHDQVEQLAARSHEIGQVLTVIGDIAGRTNLLALNAAIEAARAGEAGRGFAVVAEEVRALA QRTQDSTQQIERIIGSLQASVEQAVACMAGSRQQAQAIAAEARQAAQALHGITQRVGRISDMNIQIASAVEQQSAVGDDI QRNLQGIRQACTGTTEASARSHHSAGQLANLAERLQLLVEQFWSQRQGRPG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0512 | NP_230163.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 2e-87 | 47 |
