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Name : fliP (Pmen_4422) Accession : YP_001189901.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : 3.1.1.3 Position : 4843436 - 4844188 bp Length : 753 bp Strand : + Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGCTGCGCCGGCTGCTGCAACTCGGCCTGCTGCTGGCGGCCCTGTGCTGCCCGCTGCTGGCCCAGGCGGCTGGCGGCGA CATCACCCTGTTCAACTTCAACGACAGCGAAGACGGCCAGACCCTCAGCGTCAAACTGCAGATCCTGCTGATCATGACGC TGCTGGGCTTTCTCCCGGCCATGCTGATGATGATGACCTGCTTCACCCGCTTCATCATCGTCCTGGCCATCCTGCGCCAG GCCATCGGCCTGCAGCAGAGCCCACCCAACCCGGTGCTGATCGGCATTGCCCTGTGCCTCACCCTGCTGGTGATGCGCCC GGTGTGGCAAGAGATGTACACCGAGGCCTATGTGCCGTTCGAAGCGGATCAGATCAGCCTCGAACAGGGTCTGGGCGAAG GCAAGCGCATCATCAGCCAGTTCATGTTGGCGCAGACCAGCAAGAACTCGCTGGAAACCCTGGTCGCCCTGGCCGGCGAA GAGCTGCCTGAGGACCTCGCCCAACTGGACTTTTCCCTGCTGCTGCCGGCCTTCGTACTGAGCGAGCTGAAGACCGCCTT CCAGCTCGGCTTCATGATCTTCGTGCCCTTTCTGGTGATCGACCTGGTGGTGGCCAGCGTGCTGATGGCGATGGGCATGA TGATGCTGTCGCCGATGATGATCTCGCTGCCGTTCAAGCTGCTGGTCTTCGTGCTGGTCGACGGCTGGACGCTGCTGGTC GGCACCCTCACCAGCAGTATTCAGCCCTATTAG Protein sequence : MLRRLLQLGLLLAALCCPLLAQAAGGDITLFNFNDSEDGQTLSVKLQILLIMTLLGFLPAMLMMMTCFTRFIIVLAILRQ AIGLQQSPPNPVLIGIALCLTLLVMRPVWQEMYTEAYVPFEADQISLEQGLGEGKRIISQFMLAQTSKNSLETLVALAGE ELPEDLAQLDFSLLLPAFVLSELKTAFQLGFMIFVPFLVIDLVVASVLMAMGMMMLSPMMISLPFKLLVFVLVDGWTLLV GTLTSSIQPY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 2e-18 | 42 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 3e-18 | 42 |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 3e-18 | 42 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 3e-18 | 42 |
| hrcR | BAB07862.1 | HrcR | Virulence | Hrp PAI | Protein | 2e-18 | 41 |
| hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 3e-18 | 41 |
| hrcR | AAB06005.2 | HrcR | Virulence | Hrp PAI | Protein | 3e-21 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_001189901.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 1e-40 | 55 |
| fliP | YP_001189901.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 1e-40 | 55 |
| fliP | YP_001189901.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 3e-39 | 53 |
| fliP | YP_001189901.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 8e-42 | 53 |
| fliP | YP_001189901.1 | flagellar biosynthesis protein FliP | VFG0394 | Protein | 9e-19 | 43 |
| fliP | YP_001189901.1 | flagellar biosynthesis protein FliP | VFG0044 | Protein | 3e-18 | 42 |
| fliP | YP_001189901.1 | flagellar biosynthesis protein FliP | VFG0188 | Protein | 6e-17 | 42 |
| fliP | YP_001189901.1 | flagellar biosynthesis protein FliP | VFG2455 | Protein | 1e-17 | 41 |
