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Name : ssuB (Pmen_4320) Accession : YP_001189799.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Unknown Product : aliphatic sulfonates transport ATP-binding subunit Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1116 EC number : - Position : 4734542 - 4735342 bp Length : 801 bp Strand : - Note : part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease DNA sequence : ATGACTGCGCTGCACAGCATCCGCCAGGGCATCCCGTTGGCAATCGAGAGGATCGAGAAATCCTTCGGCGAGCGTCGGGT GCTCAAGGGCATCGACCTGCATATCCCGGCCGGCCAGTTCGTCGCCGTGGTCGGTCGCAGCGGCTGCGGCAAGAGCACGC TGCTGCGCCTGCTGGCCGGGCTGGATCAGCCCAGCGGCGGCCAGCTGCTGGCCGGCAGCGGCTCGCTCAACGCGGTGCGC GAGGACATTCGCCTGATGTTCCAGGATGCGCGCCTGCTGCCCTGGAAGCGGGTGATCGACAACGTCGGTCTGGGCCTTTC CGGCAGCTGGCGCCAGCAGGCCGAGGAAGCGCTGGCCGCGGTCGGCCTGGCGGACCGCGCAGGTGAGTGGCCGGCGGCGC TGTCCGGCGGGCAGAAGCAGCGCGTGGCCCTGGCCCGCGCGCTGATCCATCGGCCGCGCCTGCTGCTGCTCGACGAACCG CTGGGCGCGCTGGATGCGCTGACGCGGATCGAGATGCAGCAACTGATCGAGCGCCTGTGGCAGCAGCATGGTTTCACCGT GCTGCTGGTCACTCACGACGTCGCCGAGGCGGTGGCCGTGGCGGACCGGGTGATTCTCATCGAGGACGGCCAGATCGGCC TCGACCTCGATGTGCAATTGATTCGTCCGCGTCCGCATGGCTCGCCGCTGCTGGCGGCGCTGGAAGCGCGCGTGCTCGAC CGGGTGCTGGCGCAGCCGGAGCTGCCGACGCCGCCCGACCCCGTATCACCCCTGCCCACGCAATTGCGTTGGGCGCTGTG A Protein sequence : MTALHSIRQGIPLAIERIEKSFGERRVLKGIDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLDQPSGGQLLAGSGSLNAVR EDIRLMFQDARLLPWKRVIDNVGLGLSGSWRQQAEEALAAVGLADRAGEWPAALSGGQKQRVALARALIHRPRLLLLDEP LGALDALTRIEMQQLIERLWQQHGFTVLLVTHDVAEAVAVADRVILIEDGQIGLDLDVQLIRPRPHGSPLLAALEARVLD RVLAQPELPTPPDPVSPLPTQLRWAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABA47263.1 | ABC transporter | Not tested | S-PAI | Protein | 4e-27 | 47 |
