Gene Information

Name : Pmen_4226 (Pmen_4226)
Accession : YP_001189705.1
Strain : Pseudomonas mendocina ymp
Genome accession: NC_009439
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 4632137 - 4632589 bp
Length : 453 bp
Strand : +
Note : TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein, MerR

DNA sequence : 
ATGAAAATCGGTGAACTGGCGAAAAAGGCCGGCTGCCAGGTGGAGACCGTCCGTTACTACGAGCGCGAGGGCCTGCTGCC
CGCGCCCGCGCGCAGCGAGGGCAACTATCGCCTGTACGGCCCGGAGCATCTGGAACGGCTGGTGTTCATCCGCAACTGCC
GCACCCTGGACATGACCCTGGAGGAGATTCAGCGCCTGCTGGCCCTGCGCGATCTGCCCAGGGAAAGCTGCGCCGACATC
AACAGCCTGGTGGACGAGCACATCGAGCATGTGCAGGCGCGGATCAACAGCCTGCAGGCGCTGCGCGACCAGCTGCTGGA
ACTGCGCGACCGCTGCAACGGCACGCAGGAGGCGCAGGCCTGCGCGATTCTGCGCCAGCTCAATGCCAGCGGCGGCGTAC
AGCCGTTACCGGACGATGGCCATACCCATGTCGGCAAGAGCCACTCGCACTAG

Protein sequence : 
MKIGELAKKAGCQVETVRYYEREGLLPAPARSEGNYRLYGPEHLERLVFIRNCRTLDMTLEEIQRLLALRDLPRESCADI
NSLVDEHIEHVQARINSLQALRDQLLELRDRCNGTQEAQACAILRQLNASGGVQPLPDDGHTHVGKSHSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 2e-36 54
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 3e-33 49
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 2e-33 49
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 2e-33 49
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 2e-33 49
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-33 49
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 2e-33 49
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 2e-33 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pmen_4226 YP_001189705.1 MerR family transcriptional regulator BAC0058 Protein 1e-47 65
Pmen_4226 YP_001189705.1 MerR family transcriptional regulator BAC0301 Protein 3e-32 59