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Name : Pmen_4225 (Pmen_4225) Accession : YP_001189704.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Resistance Product : heavy metal translocating P-type ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 4629853 - 4632057 bp Length : 2205 bp Strand : - Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein DNA sequence : ATGAGCCGTTGCTGCGACCATTCGCACGAACCCGTTGCCGGGGGCGGGCAGCCCGTCGGGCATGAGCACCACGCTGCTCC CCAGCTGCAGTCTGACGAGGCGCTGGGCGGTGCGTTCACCACGCGCATCCGCATCGAGCAGATGGACTGTCCGACCGAGG AGCGGCTGCTCCGCGATGCCCTGGGCAAGCTGCCGGGCGTCGCCGCCCTGCATTTCAATCTGCTGCAGCGCGTGCTCACC GTCGGCCATGACGAAGGCGCGCTGACGCGCGTGCTGTCGGCGATCCGGGCGCTGGGGTTCACCCCGCAGGTGGAAGGGCA GGCTGGGGCGCCTGCGCCCGCCGTAGCGCCTGCGCACAAACCCTGGTGGCCGCTGGCGCTGGCCGGCGTGCTGGCCACGG CCTCGGAGCTGGTGCATTTCGCGGCTCTCGGTCCCGACTGGCTGGTGGCGCTGCTCGCCGTGATGGCCATCGCCATCTGC GGGCCGAGCACCTACAGAAAAGGCTGGGTCGCCCTGAAGAACCGCAACCTCAACATCAATGCGCTGATGAGCATCGCCGT GACCGGCGCGGTGCTGACCGGCCAGTGGCCGGAAGCGGCGATGGTGATGGTGCTTTTCACCCTGGCCGAGCTGATCGAGG CGCGTTCGCTGCAGCGGGCGCGCAACGCCATTGCCAGTCTGATGGACCTGGCACCGCCGCGCGCCACGCGGCGCCAGGCC GATGGCAGCTGGCAGGAGGTGGACGTGCAGGCGGTGGCGGTCGGCGATGTGCTGCGGGTGCGGCCGGGCGAACGCATCGG CCTGGATGGCGAGGTGATCGCCGGTGCCTCGACGGTCAACCAGGCGCCGATCACCGGTGAGAGCCTGCCGCTGGACAAGG GCGTCGGTGACACGCTGTTCGCCGGCACCATCAACCAGGCGGGGTCGCTGGAATACCGGGTGACGGCGGCGGCGCGCGAC ACCACGCTGGCGCGCATCATCCATGCGGTGGAGGAGGCGCAGGGCTCGCGCGCGCCGACCCAGCGCTTCGTCGATCGCTT CTCGCGCATCTATACCCCCACGGTGTTCGCCTTCGCCCTGGCGGTCGCCGTGCTGCCGCCGCTGTTGGCGGGCGGCGCCT GGCTCGACTGGATCTACCGCGCGCTGGTGCTGCTGGTGGTGGCCTGCCCCTGCGCGCTGGTGATTTCCACGCCGGTGACC ATCGTCAGCGGCCTGGCCGCGGCGGCGCGCAAGGGCATCCTGATCAAGGGCGGCGTGTACCTGGAAAGCGGTCGACACCT GGCGCTGCTGGCGCTGGACAAGACCGGCACCCTGACCCATGGCAAACCGGTGCAGACCGACTGCCTGAGCCTGGGCGATG GCGATACGCAGCAGCTCGCGCTGTGGGCTGCCAGCCTGGCGGCGCGTTCCGATCACCCGGTTTCCCAGGCGCTGGCCCGT GCCCTGGAGGGCCAGGCGCTGGCTGAAGTGGAGGCGTTCGAGGCGTTGCCGGGGCGCGGCACCCGCGGCCGTATCGACGG GCGCCTGCTGCACCTGGGCAATCACCGCCTGGTCGAGGAACTCGGGCTGTGCTCGCCGGCACTGGAGCAGCGCCTGGAGG CGTTGGAGCGGCAGGGCAAGAGTGTGGTGCTGCTGTGCGACGAGCAGCGTGCGCTGATGCTCTTCGCCGTGGCCGACACG CTACGCCAGAGCAGCCGCGAGGCGGTGCAGCAGTTGCACGCGCTGGGCGTGCGCACCTGCATGCTCAGCGGCGACAACGC CCACACCGTGGCGGCCATCGCCGAACAGGTCGGCATCGACGAGGCGCGCGGCGACCTGCTGCCGGCGGACAAGCTGGCCT GGGTCGAGACGCGTCAGGCACAGGGGCGGGTGGTCGGCATGGTCGGCGATGGCATCAACGACGCACCGGCGCTGGCCAAG GCGCAGATCGGCTTCGCCATGGGCGCTGCCGGCACCGACACGGCCATCGAGACGGCGGATGTTGCGCTGATGGATGACGA CCTGCGCAAGATCCCCGCCTTCGTCCGCCTGTCCCGCCAGACCCACGCCATTCTCGTGCAGAACATCGTGCTGGCGCTGG GCATCAAGGCGATCTTCCTGGCCCTGACCCTGGCTGGCGAGGCGACAATGTGGATGGCCGTGTTCGCCGACATGGGCGTG AGCCTTCTGGTGGTGTTCAACGGCCTGCGCCTGCTGCGCAAGTGA Protein sequence : MSRCCDHSHEPVAGGGQPVGHEHHAAPQLQSDEALGGAFTTRIRIEQMDCPTEERLLRDALGKLPGVAALHFNLLQRVLT VGHDEGALTRVLSAIRALGFTPQVEGQAGAPAPAVAPAHKPWWPLALAGVLATASELVHFAALGPDWLVALLAVMAIAIC GPSTYRKGWVALKNRNLNINALMSIAVTGAVLTGQWPEAAMVMVLFTLAELIEARSLQRARNAIASLMDLAPPRATRRQA DGSWQEVDVQAVAVGDVLRVRPGERIGLDGEVIAGASTVNQAPITGESLPLDKGVGDTLFAGTINQAGSLEYRVTAAARD TTLARIIHAVEEAQGSRAPTQRFVDRFSRIYTPTVFAFALAVAVLPPLLAGGAWLDWIYRALVLLVVACPCALVISTPVT IVSGLAAAARKGILIKGGVYLESGRHLALLALDKTGTLTHGKPVQTDCLSLGDGDTQQLALWAASLAARSDHPVSQALAR ALEGQALAEVEAFEALPGRGTRGRIDGRLLHLGNHRLVEELGLCSPALEQRLEALERQGKSVVLLCDEQRALMLFAVADT LRQSSREAVQQLHALGVRTCMLSGDNAHTVAAIAEQVGIDEARGDLLPADKLAWVETRQAQGRVVGMVGDGINDAPALAK AQIGFAMGAAGTDTAIETADVALMDDDLRKIPAFVRLSRQTHAILVQNIVLALGIKAIFLALTLAGEATMWMAVFADMGV SLLVVFNGLRLLRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C97 | AAN62190.1 | putative metal-transporting P-type ATPase | Not tested | PAGI-2(C) | Protein | 0.0 | 68 |
| cadA | BAC57487.1 | Probable cadmium-transporting ATPase (Cadmium efflux ATPase) | Not tested | Type-IIIinv SCCmec | Protein | 2e-109 | 46 |
| unnamed | BAB47609.1 | cadmium resistance protein B | Not tested | Type-III SCCmec | Protein | 2e-109 | 46 |
| SE0075 | NP_763630.1 | cadmium resistance protein B | Not tested | SCCpbp4 | Protein | 2e-108 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pmen_4225 | YP_001189704.1 | heavy metal translocating P-type ATPase | BAC0298 | Protein | 0.0 | 68 |
| Pmen_4225 | YP_001189704.1 | heavy metal translocating P-type ATPase | BAC0461 | Protein | 2e-72 | 42 |
