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Name : Pmen_0042 (Pmen_0042) Accession : YP_001185548.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 41701 - 42147 bp Length : 447 bp Strand : + Note : - DNA sequence : ATGGAAGACGAGCTGGAAGCCGATCCGCAACGCCTGGCCCTCGAACAGGCCATTCAAGTGCTCAGGCCCCTGCGCCAGCA CCGCCAGGCAAGTGCCGAGCGGCAGCAGCGGCAGATGCAGCAGACGCTTGCCAGCAGCCGTGAACGTTTGGCGGAAACCC GTGAACGGCTGGGCAGCGAGCGCCAGGCGCAATTGGCACGTCGCGAGGCACTGGCGCAGCAACACGTGGATCGTTGCCTG AGCCTGGATGAAGTCGAGCTCTGGCACAACCAGGAGCGGGCGATGCTCGATCGCCTGGCGCACATGCGTCAGGACATTCA CCGGCAGGGCCTGGCGATCGAGCAGCAACAACATCAACTGCAGGTCATGCAGGCTCAAGCCAAGGCGGCTCAGCGTGCGG TGGAAAAACTGTCCTGCCTGGCCGAGGCGATCAACGATGAAAACTGA Protein sequence : MEDELEADPQRLALEQAIQVLRPLRQHRQASAERQQRQMQQTLASSRERLAETRERLGSERQAQLARREALAQQHVDRCL SLDEVELWHNQERAMLDRLAHMRQDIHRQGLAIEQQQHQLQVMQAQAKAAQRAVEKLSCLAEAINDEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpO | AAT96196.1 | HrpO | Virulence | T-PAI | Protein | 2e-22 | 55 |
| hrpO | AAT96142.1 | HrpO | Virulence | T-PAI | Protein | 7e-22 | 54 |
| hrpO | ABQ88355.1 | HrpO | Virulence | Hrp PAI | Protein | 4e-25 | 53 |
| hrpJ5 | AAA81943.1 | HrpJ5 | Virulence | Hrp PAI | Protein | 4e-25 | 53 |
| hrpO | NP_791226.1 | type III secretion protein HrpO | Virulence | Hrp PAI | Protein | 2e-24 | 53 |
| hrpO | AAG33880.1 | HrpO | Virulence | Hrp PAI | Protein | 1e-24 | 53 |
