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Name : Pmen_4003 (Pmen_4003) Accession : YP_001189482.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Unknown Product : spermidine/putrescine ABC transporter ATPase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG3842 EC number : - Position : 4376649 - 4377746 bp Length : 1098 bp Strand : - Note : TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase DNA sequence : ATGGCAAACGATGTACTGGTGAGCTTCCGCGGCGTGCAGAAGAGCTACGATGGCGAGACGCTGATCGTCAAAGACCTCAA CCTGGATATCCGCAAGGGCGAGTTCCTGACCCTGCTCGGCCCGTCCGGCTCCGGCAAGACCACCAGCCTGATGATGCTGG CCGGTTTCGAAACTCCCACCGCCGGCGAGATCCTCCTCGACGGCCGTTCGCTGAACAAACTGCCGCCGCACAAGCGTGAC ATCGGCATGGTGTTCCAGAACTATGCGCTGTTCCCGCACATGACCGTGGCCGAGAACCTCGCCTTCCCGCTGAGCGTGCG CGGTATGTCGCGCACCGATATCAGCGAGCGGGTCAAGCGCGCGCTGTCCATGGTGCAGCTCGACAGCTTCCGCAATCGTT ATCCGGGCCAGCTCTCCGGTGGTCAGCAGCAGCGCGTGGCACTGGCCCGTGCGCTGGTGTTCGAGCCGCAACTGGTGCTG ATGGACGAACCCCTCGGCGCGCTGGACAAGCAACTGCGCGAACACATGCAGATGGAAATCAAGCACCTGCACCAGCGCCT GGGCGTGACCGTGGTCTACGTGACCCACGACCAGGGCGAGGCGCTGACCATGTCCGACCGCGTGGCCGTATTCCACCAGG GCGAGATCCAGCAGATCGCCCCGCCGCGCGACCTCTACGAGGCGCCGCACAACACCTTCGTCGCCCAGTTCATCGGTGAG AACAACCGCCTGGCCGGCGAGCTGGTCAGCCGAGATGGTGAAGAGTGCGTGGTGCGCCTGGCACGCGGCGAGGAAGTGCG CGCCACGGCGGTCAACGTCGGCGCCGTGGGCGAGGCGGTGAGCCTGTCGATCCGACCCGAGCGCATCCGCCTCAACGGCC ACAGCGAGGCCTGCCCGAACCGTTTCTCCGGGCGCATCGCCGAGTTCATCTACCTAGGCGATCACGTGCGCATCCGCATG GAGGTCTGCGGCAAGTCCGATTTCTACGTCAAGCAACCCGTGGCCGAGCTCGATCCGCAGCTGGCGGTTGGTGACCTGGT TCCGCTCGGCTGGTCTGTCGAGCATGTCCGCGCGCTCGACCCACTCCAAGCCGAGTGA Protein sequence : MANDVLVSFRGVQKSYDGETLIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMMLAGFETPTAGEILLDGRSLNKLPPHKRD IGMVFQNYALFPHMTVAENLAFPLSVRGMSRTDISERVKRALSMVQLDSFRNRYPGQLSGGQQQRVALARALVFEPQLVL MDEPLGALDKQLREHMQMEIKHLHQRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIAPPRDLYEAPHNTFVAQFIGE NNRLAGELVSRDGEECVVRLARGEEVRATAVNVGAVGEAVSLSIRPERIRLNGHSEACPNRFSGRIAEFIYLGDHVRIRM EVCGKSDFYVKQPVAELDPQLAVGDLVPLGWSVEHVRALDPLQAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 9e-37 | 43 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 6e-37 | 43 |
