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Name : Pmen_3857 (Pmen_3857) Accession : YP_001189336.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Unknown Product : diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 1.1.1.193 Position : 4246834 - 4247949 bp Length : 1116 bp Strand : - Note : TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein DNA sequence : ATGAGCGAGCGCGACCATTTGTTCATGGCGCGCGCCCTGCGGCTGGCGCGCAAAGGCCTTTACTCCACCCACCCGAATCC GCGTGTCGGCTGCGTCATCGTGCGTGACGGCGAGATCGTCGGCGAGGGCTGGCATGCCCGGGCCGGCGAACCGCACGCCG AGGTGCACGCCCTGCGTCAGGCCGGCGAGCGCGCGCGCGGTGCCACCGCCTACGTCACCCTGGAACCCTGCAGCCATCAC GGGCGTACGCCGCCCTGCGCCGATGCGCTGGTCGCCGCCGGGGTCGGCCGGGTGGTCGCAGCGATGCAGGACCCCAACCC GCAAGTGGCCGGTCGCGGCCTGCTGCGCCTGGCCAATGCGGGGATCGAAGTGCTATCCGGTGTACTGGAGGCCGAGGCAC GGGCGCTCAACGTTGGCTTCATCAAGCGCATGGAAAGCGGCCTGCCATTCGTTCGGGTCAAGTCGGCGATGAGCCTGGAT GGCCGCACGGCCATGGCCAGCGGCGAGAGCCAGTGGATCACCGGGCCGGCGGCGCGTGCCGAGGTGCAGCGGTTGCGCGC GCAGTCCAGCGTGGTGCTCAGCGGCGCCGACACCGTGCTGGCCGACGACGCCCGGCTGACCGTGCGCCCCGACGAGTTGG GGCTGGGCGCAGAAGCGACGTTCATGGCCGCCTCGCGGCCGCCGCTGCGGGTGCTGATCGATGGTCGGTTGCGGGTACCG CTGAGCAAGGCGTTCTTCCAGGTCGGCCCGGCGCTGGTGGCCACCTGTGCGGCTGCAGCTGCGCGCGACCGCTACCTGGC CGACGACCACGAACTGCTCGCCGTGCCGGGTAGCAATGGTCATGTCGACCTGCGCAAGCTGCTGCAGGAGCTGGCCGGGC GTGGCGTCAACGAAGTATTGGTGGAGGCCGGGCCGCGTCTGGCTGGCGCCTTCGCCCGCGCCGGGCTGGTGGACGAGTAC CGCATCTTCGTTGCGCCCAAACTGCTGGGTTCCAGTGCTCGGCCGTTGTTCGAGCTGCCGCTCAACCGCATGGCCGAGGC GCCGGAGTTGCAGATTGTCGATATCCGCGCCGTGGGTGACGACTGGCAGATCACCGCGGTGCCCAAGACCAGGTAG Protein sequence : MSERDHLFMARALRLARKGLYSTHPNPRVGCVIVRDGEIVGEGWHARAGEPHAEVHALRQAGERARGATAYVTLEPCSHH GRTPPCADALVAAGVGRVVAAMQDPNPQVAGRGLLRLANAGIEVLSGVLEAEARALNVGFIKRMESGLPFVRVKSAMSLD GRTAMASGESQWITGPAARAEVQRLRAQSSVVLSGADTVLADDARLTVRPDELGLGAEATFMAASRPPLRVLIDGRLRVP LSKAFFQVGPALVATCAAAAARDRYLADDHELLAVPGSNGHVDLRKLLQELAGRGVNEVLVEAGPRLAGAFARAGLVDEY RIFVAPKLLGSSARPLFELPLNRMAEAPELQIVDIRAVGDDWQITAVPKTR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 2e-63 | 48 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 2e-63 | 48 |
