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Name : Pmen_3549 (Pmen_3549) Accession : YP_001189029.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Unknown Product : nucleoid-associated protein NdpA Function : - COG functional category : R : General function prediction only COG ID : COG3081 EC number : - Position : 3915943 - 3916950 bp Length : 1008 bp Strand : + Note : PFAM: 37kDa nucleoid-associated protein DNA sequence : ATGCCGATCCGCCACTGCATCGTCCACCTGATCGACAAGAAACCCGACGGCAGCCCCGCCGTGCTGCACGCCCGCGACAG CGAACTGGCCACCTCGCAAGCCATGGAGAACCTGCTGGCCGACCTCAACGAGAGCTACAACGCCAAGCAGGGCAAGGCCT GGGGCCTGTTCCACGAAGAGTCCGGCGCCTACCCGTTCAGCGGCTGGCTCAAGGCCTACCTCGACGGCGAACAGGACTTC ACCGCCTTCAGCCGCCAGGCCGTCGAACATCTGCAGAAGCTGATGGAAGAATCCAACCTCTCCACCGGCGGTCACGTGCT GTTCGCCCACTACCAGCAAGGCATGACCGACTACCTGGCCATCGCCCTGCTGCACCACAGCGAAGGCGTGGCGGTGACCG ACGCACTGGACGTGACCCCGGCCAAGCACCTCGACCTGGGCCAGCTGCACCTGGCCGCGCGCATCAACATCAGCGAGTGG CAGAACAACAAGCAGTCCAAGCAGTACATCTCCTTCATCAAGGGCAAGAACGGCAAGAAGGTGTCGGACTACTTCCGCGA CTTCATCGGCTGCCAGGAAGGCGTCGATGGCCCGGGCGAGACCCGCACCCTGCTCAAGGCCTTCAGCGATTACGTGGAAA GCGAGGACCTGCCCGAAGAGCAGGCCCGCGAGAAGACCAAGACCCTGGTCGGCTACGCCACCGGCCAGGCCAAGATGGGC GAGCCGATCACCCTGGAGGAGCTGTCCGGGCTGATCGACGAGGAGCGCCCCAAGGCGTTCTACGAGCACATCCGCAACAA GGACTACGGCATGGCCCCGGAATTTCCGGCGGACAAGCGCACCCTCAGCCAGTTCCAGCGCTTCACCGGGCGCGCCGAGG GGCTGTCGATCAGCTTCGAGGCGCACCTGCTCGGCTCGAAGATCGAGTACGACGAGGGCCGCGACATGCTGATCATTCGC CAGCTGCCGACCCAGCTGAAGGATCAGCTCAAGCGTCGCCAGGACTGA Protein sequence : MPIRHCIVHLIDKKPDGSPAVLHARDSELATSQAMENLLADLNESYNAKQGKAWGLFHEESGAYPFSGWLKAYLDGEQDF TAFSRQAVEHLQKLMEESNLSTGGHVLFAHYQQGMTDYLAIALLHHSEGVAVTDALDVTPAKHLDLGQLHLAARINISEW QNNKQSKQYISFIKGKNGKKVSDYFRDFIGCQEGVDGPGETRTLLKAFSDYVESEDLPEEQAREKTKTLVGYATGQAKMG EPITLEELSGLIDEERPKAFYEHIRNKDYGMAPEFPADKRTLSQFQRFTGRAEGLSISFEAHLLGSKIEYDEGRDMLIIR QLPTQLKDQLKRRQD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| RL104 | AAP84229.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 9e-136 | 81 |
