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Name : Pmen_0358 (Pmen_0358) Accession : YP_001185863.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Unknown Product : RNA-binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 367332 - 369656 bp Length : 2325 bp Strand : - Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold DNA sequence : ATGGACAGCATCAACAACCGCATCGCCGAAGAGCTGGGCGTGCGCCCGCAACAGGTCGCCGCCGCCGTGGCCCTGCTCGA CGAAGGCTCCACCGTGCCCTTCATCGCCCGTTACCGTAAAGAAGTGACCGGCAGCCTCGACGACACCCAGCTGCGCCATC TGGAAGATCGCCTGCGCTACCTGCGCGAGCTGGACGAGCGCCGCGTGGCGATCCTCGCCAGCATCGAGGAACAGGGCAAG CTGACCCCCGAACTCAAGCGCGAGATCGACCTGGCCGACACCAAGACGCGCCTCGAAGACCTGTATCTGCCGTACAAGCA GAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGCCTCGGCGAGCTGGCCGATGCGCTGTTCAACGATCCGAACC TGACCCCGGAGCAGGAAGCCGAGCGCTTCATCGACGCCGACAAAGGCTTCGCCGACGTCAAGGCCGTGCTCGAAGGCGCC AAGTACATCCTCATGGAGCGTTTTGCAGAGGACGCGAGCCTGCTGGACAAGCTGCGCAGCTTCCTCAAGGACAACGCCAC CCTCAGCGCCCGCCTGGTGCCGGGCAAGGAAAACGAGGGCGCCAAGTTCAGCGACTACTTCGAGCACGACGAGCCGCTTA AGGGCGTGCCGTCGCACCGCGCGCTGGCGATCTTCCGCGGCCGCAACGAAGGCATTCTCAGCGCCAGCCTCAAGGTCGGC GAAGAGCTGCCCGGTACCCTGCACCCCTGCGAGCTGATGATCGGCGAGCGCTTCGGCCTGCAGAACCAGGGCCGCGCCGC CGACAAGTGGCTGGCCGAGGTGGTGCGCTGGACCTGGAAGGTCAAGCTGTACAACCACCTGGAAACCGACCTGCTCGGCG AGCTGCGCGAGAAGGCCGAGGACGAGGCGATTGCCGTGTTCGCCCGCAACCTGCACGACCTGCTGCTGGCCGCGCCGGCC GGCCCGCGCGCCACCCTGGCGCTGGACCCGGGCCTGCGCACCGGCTGCAAGGTGGCGGTGGTCGATGCCACCGGCAAGGT GCTGGAAACCGCCACCGTCTACCCGCACGCCCCGCGCAACGACTGGGACGGCACCTTGGCCATCCTCGCCAAGCTGTGCG CCAAGCACGGCGTCGACCTGATCTCCATTGGCAACGGCACCGCCAGCCGCGAGACCGACAAGCTGGCCGCCGAGCTGATC AAGAAGGTGCCGGGCCTGAAGCTGACCAAGGTGATGGTCTCCGAAGCCGGCGCCTCGGTGTATTCGGCCTCGGAACTGGC CGCCCGCGAGTTCCCCGATCTCGACGTGTCGCTGCGCGGCGCAGTGAGCATCGCCCGCCGCCTGCAGGATCCCCTGGCCG AGCTGGTGAAGATCGACCCGAAATCCATCGGCGTCGGCCAGTACCAGCACGATGTGTCGCAGCTCAAGCTGGCGCGCTCG CTGGACGCCGTGGTCGAGGACTGCGTGAACGCCGTTGGCGTCGATGTGAACACCGCCTCCGCCGCCCTGCTGGCACGCAT TTCCGGCCTCAACGCGACCCTGGCGCAGAACATCGTGCAGTACCGCGATGCCAACGGCGCCTTCGCCTCGCGCGCCGAGC TGAAGAAGGTGCCGCGCCTGGGCGAGAAGACCTTCGAGCAGGCCGCCGGCTTCTTGCGAGTGATGAACGGCGACAACCCG CTGGATGCCTCCGCGGTGCACCCGGAAACCTACCCGCTGGTCGAGCGCATCGCCCAGGACACCGGCCGCGACATCCGCTC GCTGATCGGCGACTCGGCCTTCCTCAAGCGCCTCGACCCGGCCAAGTTCACCGACGAGCGCTTCGGCCTGCTCACCGTCG GCGACATCCTCAAGGAACTGGACAAGCCCGGCCGCGACCCGCGCCCGGAATTCAAGACCGCCGAGTTCCAGGAGGGCGTG GAAACCCTCAATGACCTCAAGCTGGGCATGGTGCTCGAAGGCGTGGTGACCAACGTCACCAACTTCGGCGCCTTCGTCGA CATCGGTGTGCACCAGGACGGCCTGGTGCACATCAGCGCGCTGTCGGAGAAGTTCATCAAGGACCCGCACGAGGCGGTCA AGGCCGGCGACGTGGTCAAGGTCAAGGTGATGGAAGTGGACATCCCGCGTAACCGCATCGCCCTGTCCATGCGCATGGGC GACACCCCGGGCGAGAAGGTAGAGGGCGCACGCGGTGGTGCGCGCGGCGGCAACCGTGGCGGCAATACGCCGCGCAGCGA GCGCCATTCCAGCCAGGACAAGCCGGCACCGGCCACCGGGGGCATGGCCGCGCTGTTCGCCAACGCCAAGCAGCTCAAGC GATGA Protein sequence : MDSINNRIAEELGVRPQQVAAAVALLDEGSTVPFIARYRKEVTGSLDDTQLRHLEDRLRYLRELDERRVAILASIEEQGK LTPELKREIDLADTKTRLEDLYLPYKQKRRTKGQIALEAGLGELADALFNDPNLTPEQEAERFIDADKGFADVKAVLEGA KYILMERFAEDASLLDKLRSFLKDNATLSARLVPGKENEGAKFSDYFEHDEPLKGVPSHRALAIFRGRNEGILSASLKVG EELPGTLHPCELMIGERFGLQNQGRAADKWLAEVVRWTWKVKLYNHLETDLLGELREKAEDEAIAVFARNLHDLLLAAPA GPRATLALDPGLRTGCKVAVVDATGKVLETATVYPHAPRNDWDGTLAILAKLCAKHGVDLISIGNGTASRETDKLAAELI KKVPGLKLTKVMVSEAGASVYSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARS LDAVVEDCVNAVGVDVNTASAALLARISGLNATLAQNIVQYRDANGAFASRAELKKVPRLGEKTFEQAAGFLRVMNGDNP LDASAVHPETYPLVERIAQDTGRDIRSLIGDSAFLKRLDPAKFTDERFGLLTVGDILKELDKPGRDPRPEFKTAEFQEGV ETLNDLKLGMVLEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFIKDPHEAVKAGDVVKVKVMEVDIPRNRIALSMRMG DTPGEKVEGARGGARGGNRGGNTPRSERHSSQDKPAPATGGMAALFANAKQLKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 61 |
