Gene Information

Name : Pmen_3345 (Pmen_3345)
Accession : YP_001188829.1
Strain : Pseudomonas mendocina ymp
Genome accession: NC_009439
Putative virulence/resistance : Unknown
Product : glycerol kinase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0554
EC number : -
Position : 3692687 - 3694174 bp
Length : 1488 bp
Strand : -
Note : TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase, FGGY

DNA sequence :
ATGTCCAAATACCTGCTAGCCATCGATCAGGGCACCACCAGTTCCCGTGCCATCATCTTCAGTGCCCAGGGCTTGCCGGT
GGCGCGTGCCCAGCAGGAGTTCAAGCAGTATTTTCCGCAGGACGGCTGGGTCGAGCACGATGGCCAGGAAATCTGGCTGT
CCACCCTCAAGGTCTGTCGCGAGGCCATCGCCAGCAGCGGCCTGCAGGCGGAGGCGATCGCTGCCATCGGCATCACCAAT
CAGCGTGAGACCACCCTGGTGTGGGATGCCGCCAGCGGCACGCCCATTCACCTGGCCATCGTCTGGCAGGACCGCCGTAC
CGCCGATTATTGCGCCGGCCTCAAGGATGCAGGGCACGAGGCCATGGTGTCGGCCAAGACAGGTCTGCTGATCGACCCCT
ATTTCTCCGCCACCAAGCTGCGCTGGATCCTGGAAAACGTACCCGGCGCCCGCGAGCGTGCGCAGCGCGGCGAGCTGCGC
TTCGGTACGGTGGACAGCTTCCTGTTGTGGCGCCTAACCGGTGGCAAGGTGCATCGTACCGATGCCAGCAATGCCTCGCG
CACCCTGATGTTCAACATCCACACCCAGCAATGGGATCAGGACTTGCTCGAGTTGTTCGACATCCCTGCCAGCCTGTTGC
CCGAGGTGCTCGATTGCGCGGCCGAGTTCGGTCATGCCGAAGCCGAGCTGCTCGGTGCCAGTATTCCGGTGCTGGGCATG
GCCGGCGATCAGCAGGCGGCGCTGATCGGTCAGGCCTGCTTCGAGCCCGGCATGGTCAAGAGCACCTATGGCACCGGCTG
TTTCATGATCCAGAACACCGGCGATCAGCCGGTGAGCTCGAAGAATCGCCTGCTGACCACCGTCGGCTATCGCCTGGGTG
GCAAGGTCACCTACGCCGTGGAGGGCAGCATCTTCGTCGCCGGGGCGGCGGTGCAGTGGCTGCGCGACGGCATCAAGCTG
ATCAGCCATGCGCGTGACAGCGAGGCGCTGGCCGAGGCCACCGGCGAGGCCTGTGGCGTCTACCTGGTACCGGCCTTCAC
CGGCCTGGGCGCGCCGTACTGGGACCCCAAGGCGCGCGGCGCGATCTTCGGCCTGACCCGCGATACCGGGATCAAGGAGA
TCGTCACCGCCGGCCTGCAGTCGGTGTGCTACCAGACCCGCGACCTGCTCGAGGCCATGCGTCAGGACGGCGCCGCGGCG
CCCAGCGCGCTGCGGGTGGACGGCGGCATGGTGGAGAACAACTGGGTCATGCAGTTTCTCGCCGACATCCTCGGGGTCAG
CGTCGAGCGCCCCGAGGTCACCGAGACCACGGCGCTGGGGGTTGCCTACCTGGCCGGCCTGCAACTGGGGCTCTATCCCG
ATCTGCAGGCCATTGCCAGTCACTGGCATCGCCAGCAGCGCTTCGAGCCGAGAATGAGCGAGACGCACCGCGAGCGCCTC
TATGCCGGTTGGCTGGATGCGGTGAAGCGGGTGCGCAGCGAGGGCTGA

Protein sequence :
MSKYLLAIDQGTTSSRAIIFSAQGLPVARAQQEFKQYFPQDGWVEHDGQEIWLSTLKVCREAIASSGLQAEAIAAIGITN
QRETTLVWDAASGTPIHLAIVWQDRRTADYCAGLKDAGHEAMVSAKTGLLIDPYFSATKLRWILENVPGARERAQRGELR
FGTVDSFLLWRLTGGKVHRTDASNASRTLMFNIHTQQWDQDLLELFDIPASLLPEVLDCAAEFGHAEAELLGASIPVLGM
AGDQQAALIGQACFEPGMVKSTYGTGCFMIQNTGDQPVSSKNRLLTTVGYRLGGKVTYAVEGSIFVAGAAVQWLRDGIKL
ISHARDSEALAEATGEACGVYLVPAFTGLGAPYWDPKARGAIFGLTRDTGIKEIVTAGLQSVCYQTRDLLEAMRQDGAAA
PSALRVDGGMVENNWVMQFLADILGVSVERPEVTETTALGVAYLAGLQLGLYPDLQAIASHWHRQQRFEPRMSETHRERL
YAGWLDAVKRVRSEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glpK YP_005139160.1 glycerol kinase Not tested Not named Protein 2e-98 48