|
Name : Pmen_3117 (Pmen_3117) Accession : YP_001188602.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Unknown Product : ABC transporter-like protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1125 EC number : - Position : 3444314 - 3445252 bp Length : 939 bp Strand : + Note : PFAM: ABC transporter related; SMART: AAA ATPase DNA sequence : ATGATCGAACTCGACCGGGTCAGCCGCCGGTTTGGCGGCGTCACGGCGGTGGATGAGCTGTCGCTGCGCATCGCCAGCGG CGAGTTTTGCGTACTGGTCGGCCCCTCCGGCTGCGGCAAGTCCACCACCCTGCGCATGATCAACCGGCTGGTCGCCTGCA GCAGCGGGCAGATCCGTATCGATGGCCAGGACATCGCCACGCTCGACGAGCGCCTTCTGCGGCTGCGCATCGGTTATGCC ATCCAGAACACCGGGCTGTTCCCGCACTGGACGGTGGCGCGCAACATCGCCCTGGTGCCGCAGCTGCTCGGCTGGCCACG GTCGCGCATCGAGGCGCGGGTCGGCGAGCTGCTGGCGCTGTTCGAACTGCCGGCCGCCGAGTTCGCCGACAAGTACCCGG ACCAGCTCTCCGGCGGCCAGGCCCAGCGCGTCGGCGTGGCCCGTGCGCTGGCCGGCGATCCGGAAATCCTGCTGATGGAC GAGCCGTTCGGCGCGCTCGATCCGATCACCCGCGACAACCTGCAGAACGAGCTGCTGCGCATCCAGTCGCAGATCCGCAA GACCATCGTCTTCGTCACCCACGACATCGACGAGGCGCTCAAGCTGGCCGAGCGCATCGTGGTGATGGAGCACGGGCGCA TCGTCCAGCATGGCAGCCCGCAGCAACTGCTCGACCGCCCGGCCAACGCGCTGGTCGAACAACTGCTCGGCCAGAGCGAG CGCGGCCTCAAGCGCGCCGGCCTGCGCCGGGTGGAGACGCTGATGCGGCCCCCATCCGGCGAGCCGCCGGCACAGACCAT CGCCGCCACAGCCAGCCTGCGCCAGGCGCTGTCGCACATGCTCTCGCAGCACTGCGAACGCCTGGCCGTGCGCGACACCG CGGGGCGCTGGGTCGGCGTCGTGCATCTGCTCGATGCCGTGCGAGAGGAGGCCGATTGA Protein sequence : MIELDRVSRRFGGVTAVDELSLRIASGEFCVLVGPSGCGKSTTLRMINRLVACSSGQIRIDGQDIATLDERLLRLRIGYA IQNTGLFPHWTVARNIALVPQLLGWPRSRIEARVGELLALFELPAAEFADKYPDQLSGGQAQRVGVARALAGDPEILLMD EPFGALDPITRDNLQNELLRIQSQIRKTIVFVTHDIDEALKLAERIVVMEHGRIVQHGSPQQLLDRPANALVEQLLGQSE RGLKRAGLRRVETLMRPPSGEPPAQTIAATASLRQALSHMLSQHCERLAVRDTAGRWVGVVHLLDAVREEAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 3e-53 | 52 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 2e-52 | 52 |
