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Name : Pmen_2924 (Pmen_2924) Accession : YP_001188411.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 3233114 - 3234331 bp Length : 1218 bp Strand : - Note : TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein DNA sequence : ATGGCTGCCTTCGAATACATCGCCCTGGATGGGCGCGGTCGCCAGCAGAAGGGCGTGCTGGAGGCCGACAGCGCGCGCCA GGTGCGCCAGTTGTTGCGCGAGCGCCAGCTGGCACCGCTGGAGGTCAAGGCCACGCGCACCCGCGAGCAAGCCGGCGGCG GCGCGCGTCTGGGCTTCGCCCGCGGGCTTTCGGCGCGCGACCTGGCGCTGGTAACCCGGCAGCTGGCCACCCTGGTGCAG GCGGCCCTGCCCATCGAGGAGGCGCTGCGCGCCGCGGCTGCGCAGTCGACCAACGCCCGTATTCAGGGAATGCTGCTGGC GGTGCGCGCACGCGTGCTGGAAGGTCACAGCCTGGCCGGCAGTCTGCGCGAGTTTCCCGCCGCCTTTCCCGAGCTATACC GCGCCACGGTGGCGGCGGGCGAGCATGCCGGGCATCTCGGGCCAGTGCTGGAACAGCTGGCCGATTACACCGAGCAGCGT CAGCAGTCGCGGCAGAAGGTCCAGCTGGCGCTGCTGTATCCCTTGATCCTGATGTGCGCATCCTTGCTGATCGTCGGCTT TCTGCTGGGTTACGTGGTGCCGGACGTGGTCAAGGTCTTCGTCGATTCCGGGCAGACCCTGCCGACGCTGACCCGCGTGC TGATCGCCGTGAGCGACTGGGTCAAGGCCTGGGGGCTGGTGGCCGTGGTGGTGCTGGCGCTGGCGATCATCGCGCTGCGC GCGGCGCTGCGCGATGAGGCGATGCGCCTGCGCTGGCATGCCTTTTTGCTGCGCGTGCCGCTGCTCGGCCGTCTGGGCCG TGCCACGGACTGCGCACGTTTCGCGTCCACCCTGGCGATCCTCACGCGCAGCGGCGTGCCGCTGGTCGAGGCGCTGGCAA TCGCCGGCGAGGTGATCGGCAACCGGGTGATTCGTGGCGAGGTGCTGGTGGCTGCGCAGAAGGTGCGAGAGGGCGGCAGT CTGACCCGCTCGCTGGAGGCCACCGGGCAGTTTCCGCCGATGATGCTGCACATGATCGCCAGCGGCGAGCGCTCCGGCGA GCTGGACCAGATGCTGGCACGCACGGCGAAGAACCAGGAAAACGACCTGAGCGCGCAGATCGCCCTGCTGGTCGGATTGT TCGAACCGTTCATGCTGGTGTTCATGGGGGCGGTGGTGCTGGTCATCGTACTGGCCATCCTGCTGCCGATTCTTTCGTTG AACCAAATGGTGGGATAA Protein sequence : MAAFEYIALDGRGRQQKGVLEADSARQVRQLLRERQLAPLEVKATRTREQAGGGARLGFARGLSARDLALVTRQLATLVQ AALPIEEALRAAAAQSTNARIQGMLLAVRARVLEGHSLAGSLREFPAAFPELYRATVAAGEHAGHLGPVLEQLADYTEQR QQSRQKVQLALLYPLILMCASLLIVGFLLGYVVPDVVKVFVDSGQTLPTLTRVLIAVSDWVKAWGLVAVVVLALAIIALR AALRDEAMRLRWHAFLLRVPLLGRLGRATDCARFASTLAILTRSGVPLVEALAIAGEVIGNRVIRGEVLVAAQKVREGGS LTRSLEATGQFPPMMLHMIASGERSGELDQMLARTAKNQENDLSAQIALLVGLFEPFMLVFMGAVVLVIVLAILLPILSL NQMVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 4e-55 | 46 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-55 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pmen_2924 | YP_001188411.1 | general secretion pathway protein F | VFG0181 | Protein | 3e-121 | 86 |
| Pmen_2924 | YP_001188411.1 | general secretion pathway protein F | VFG2049 | Protein | 4e-53 | 46 |
| Pmen_2924 | YP_001188411.1 | general secretion pathway protein F | VFG1870 | Protein | 3e-57 | 42 |
