|
Name : Pmen_2896 (Pmen_2896) Accession : YP_001188383.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Unknown Product : short-chain dehydrogenase/reductase SDR Function : - COG functional category : R : General function prediction only COG ID : COG4221 EC number : - Position : 3205584 - 3206306 bp Length : 723 bp Strand : + Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR DNA sequence : ATGAGCAAGGTCATTCTCATCACCGGCGCCAGCAGCGGCATCGGCGAAGCCATCGCCAGACATCTCGCAAGCCTGGGTCA CCAGGTGGTACTGGGCGCGCGGCGCATCGATCGCCTGCAGGCCCTGGTAGAAGAACTGCAGGCCCAGGGTCAACAGGCCT CGTGCCGCACCCTCGATGTCAGCCAACTGCACGACATGCAGGCTTTCGTCGAGCATGCCGAAACTCATCATGGCCCTGTC GATGTGATCATCAACAACGCCGGCGTGATGCCGCTGTCGCCGCTCAACGCCCTGAAGGTGGATGAGTGGAACCGCATGAT CGACGTCAACGTGCGCGGTGTGCTGCACGGTATCGCTGCCGTGCTGCCAGGCATGGAGAAACGCGGGCGCGGCCAGATCA TCAATATCGCCTCCATCGGTGCCCACGCCGTATCGCCGACCGCCGCGGTCTATTGCGCGACCAAGTACGCCGTCTGGGCG ATTTCCGAAGGCCTGCGCCAGGAAAGCGAGCGCGTGCGCGTCACCACCATCTGCCCGGGCGTGGTCGAGTCCGAGCTGGC CGACAGCATCACCGATGCCAGCGCCCGCGATGCGATGAAGGCCTTCCGCCGTATCGCCATCACGCCGGATGCCATCGCCC GCGCGGTGGCCTATGCAGTCGAACAGCCGGACGACGTCGATGTCAGCGAAGTCATCGTGCGCCCGACCGCCAGCCCTTAT TGA Protein sequence : MSKVILITGASSGIGEAIARHLASLGHQVVLGARRIDRLQALVEELQAQGQQASCRTLDVSQLHDMQAFVEHAETHHGPV DVIINNAGVMPLSPLNALKVDEWNRMIDVNVRGVLHGIAAVLPGMEKRGRGQIINIASIGAHAVSPTAAVYCATKYAVWA ISEGLRQESERVRVTTICPGVVESELADSITDASARDAMKAFRRIAITPDAIARAVAYAVEQPDDVDVSEVIVRPTASPY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC20627.1 | hypothetical protein | Not tested | Internalin | Protein | 2e-45 | 47 |
| adh | CAI59964.1 | short-chain dehydrogenase | Not tested | LIPI-2 | Protein | 4e-51 | 45 |
