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Name : Pmen_2501 (Pmen_2501) Accession : YP_001187989.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : 1.8.1.4 Position : 2763820 - 2765256 bp Length : 1437 bp Strand : - Note : E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide DNA sequence : ATGACCCAGAAATTCGACGTGGTAGTCATCGGTGCCGGCCCTGGTGGCTACGTAGCCGCCATCAAAGCAGCGCAACTCGG TCTGAAGACTGCCTGCATCGAGAAGTACCAGGGCAAGGACGGCAAGATCGCCCTCGGCGGTACCTGCCTGAACGTCGGTT GCATTCCCTCCAAGGCGCTGCTGGACAGCTCCTGGAAGTACCATGAAGCGAAAGAAGGCTTCGCCGTCCACGGTATCGAA GCCAAGGGCGTCACCATCGACGTGCCGGCGATGATCGGTCGCAAGGCCAACATCGTTAAGAACCTGACCGGCGGCATCGG TGCGCTGTTCAAGGCCAACGGTGTGACCCTGCTGGAAGGCCACGGCAAGCTGCTGGCCGGCAAGCAGGTTGAAGTCACCG GTATCGACGGCAAGACCCAGGTGGTCGAAGGCGCTCACGTGATCATCGCCTCTGGCTCCAAGCCGGTCGAGATCCCCCCG GCACCGGTCGATCAGGACGTGATCGTCGACTCCACCGGTGCCCTGGAATTCCAGAGCGTACCGAAGAAGCTGGGCGTCAT CGGCGCGGGCGTGATCGGTCTGGAGCTGGGCTCGGTATGGGCTCGCCTGGGCTCGGAAGTGACCGTGCTGGAAGCCATGG ACAAGTTCCTTGCCGCTGCCGACGAGCAGATCGCCAAGGAAGCCCAGAAGACCCTGACCAAGCAGGGCCTGGACATCCGC CTGGGCGCGCGCGTCACCGCCAGCGAAGTCAAGAAGAAGCAGGTTACCGTCACCTTCACCGACGCCAATGGCGAGCAGAA GATGACCTTCGACAAGCTGATCGTGGCCGTTGGCCGTCGCCCGGTGACCACCGATCTGCTGGCTGCCGACAGCGGCGTGG ATCTGGACGAGCGTGGCTTCATCTTCGTCAACGACCAGTGCGAAACCAGCGTTCCGGGCGTTTATGCCATCGGTGACGTG GTGCGTGGCGCCATGCTCGCGCACAAGGCCTCGGAAGAGGGCGTGATGGTTGCCGAGCGCATCGCCGGCCACAAGGCGCA GATGAACTACGACCTGATCCCGTCCGTGATCTACACCCACCCGGAAATCGCATGGGTCGGCAAGACCGAGCAGCAGCTGA AGGCCGAAGGCGTTGCCGTCAACGTCGGTACCTTCCCGTTCGCGGCCAGCGGCCGCGCCATGGCTGCCAACGACACCGGT GGTCTGGTCAAGGTCATCGCTGACGCCAACACCGACCGCGTACTGGGCGTTCACGTGATCGGCCCAAGCGCTGCCGAACT GGTGCAGCAGGGCGCGATCGGCATGGAATTCGGCACCAGCGCCGAAGACCTGGGCATGATGGTCTTCTCCCACCCGACCC TGTCCGAGGCGCTGCACGAAGCGGCCCTCGCGGTCAACGGTGGCGCGATCCACATCGCCAACCGCAAGAAGCGCTAA Protein sequence : MTQKFDVVVIGAGPGGYVAAIKAAQLGLKTACIEKYQGKDGKIALGGTCLNVGCIPSKALLDSSWKYHEAKEGFAVHGIE AKGVTIDVPAMIGRKANIVKNLTGGIGALFKANGVTLLEGHGKLLAGKQVEVTGIDGKTQVVEGAHVIIASGSKPVEIPP APVDQDVIVDSTGALEFQSVPKKLGVIGAGVIGLELGSVWARLGSEVTVLEAMDKFLAAADEQIAKEAQKTLTKQGLDIR LGARVTASEVKKKQVTVTFTDANGEQKMTFDKLIVAVGRRPVTTDLLAADSGVDLDERGFIFVNDQCETSVPGVYAIGDV VRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPSVIYTHPEIAWVGKTEQQLKAEGVAVNVGTFPFAASGRAMAANDTG GLVKVIADANTDRVLGVHVIGPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHIANRKKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 3e-77 | 41 |
