Gene Information

Name : Pmen_2476 (Pmen_2476)
Accession : YP_001187964.1
Strain : Pseudomonas mendocina ymp
Genome accession: NC_009439
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2741230 - 2741913 bp
Length : 684 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein

DNA sequence : 
ATGCGCATTCTGGTCATCGAAGACAACCGAGACATTCTCGCCAACGTGCTCGACTATCTGCAGCTCAAGGGCTTCTCCGT
GGACTGCGCGCAAGACGGCCTGAGCGGCCTGCACCTGGCCAGCAGCGGTCATTACGACCTGATCGTGCTGGACATCATGC
TGCCCGGCATCGACGGCTATCAGGTATGCAAGCGCCTGCGCGAGGATGGTCGCAGCGAAGTGCCGATTCTGATGCTCACT
GCGCGAGATGCGCTGGATGATCGCCTGAAAGGACTCAATGCCGGTGCCGACGATTACCTGATCAAGCCCTTCGCCCTGTC
CGAGCTGGTGGCGCGCATCGAGGCGATCCTGCGCCGCAGCCGCGGCAGCCGCAAACGCCAGCTGCAGGTCGCCGACCTTA
GCTACGACCTCGATACCCTGCACGTCAGCCGCGCCGGCCAGGCGCTCAAACTCAACCCGCTGGGCCTCAAGCTGCTGGCC
ATTCTCATGCAGCGCAGCCCGGCCGTGGTGCGCCGTGAGGCGCTGGAAGAGGCGCTGTGGGGCGACGACTGCCCGGACAG
CGACAGCCTACGCAGCCACGTTCACCAGTTGCGCCAGGTGCTCGACAAACCCTTCCCTACGCCTTTGCTGCACACCATTC
ACGGCGTCGGTTATCGCCTGGCGGAGAGCGCCGATGCTGTCTAA

Protein sequence : 
MRILVIEDNRDILANVLDYLQLKGFSVDCAQDGLSGLHLASSGHYDLIVLDIMLPGIDGYQVCKRLREDGRSEVPILMLT
ARDALDDRLKGLNAGADDYLIKPFALSELVARIEAILRRSRGSRKRQLQVADLSYDLDTLHVSRAGQALKLNPLGLKLLA
ILMQRSPAVVRREALEEALWGDDCPDSDSLRSHVHQLRQVLDKPFPTPLLHTIHGVGYRLAESADAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-32 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pmen_2476 YP_001187964.1 two component transcriptional regulator BAC0125 Protein 4e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pmen_2476 YP_001187964.1 two component transcriptional regulator VFG0596 Protein 5e-33 42