Gene Information

Name : Pmen_2432 (Pmen_2432)
Accession : YP_001187920.1
Strain : Pseudomonas mendocina ymp
Genome accession: NC_009439
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : 1.11.1.5
Position : 2691759 - 2692259 bp
Length : 501 bp
Strand : -
Note : PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein

DNA sequence : 
ATGGCGCAAGTCACCCTCAAAGGCAACCCGGTTCCGGTCGATGGCCAGCTGCCGCAGGCCGGCCAGCAGGCGCCGGCCTT
CAGTCTGGTCGGCAAGGACCTCGGCGACGTCACCCTGGCCAGCCTGGCCGGCAAGCGCAAGGTGCTGAACATTTTCCCCA
GCGTTGATACCCCGACCTGCGCCACCTCGGTGCGCAAGTTCAACGCCGAGGCCGCGCAGTTGCCCAACACCGTGGTGCTG
TGCATCTCCGCCGACCTGCCGTTCGCCCAGGCGCGCTTCTGCGGCGCAGAAGGCCTGAACGACGTGATGAACCTGTCCAC
CATGCGTGGCGCGAACTTCCTCAAGGACTACGGCGTGGCCATCGCAGCAGGCCCGCTGGCCGGCGTTGCCGCCCGAGCGG
TGGTGGTGCTGGACGAGAACGACAAGGTGCTGCACAGCGAGCTGGTCGGCGAAATCGCCGACGAGCCGAACTACGCAGCG
GCGCTGGCGGTACTCAAGTAA

Protein sequence : 
MAQVTLKGNPVPVDGQLPQAGQQAPAFSLVGKDLGDVTLASLAGKRKVLNIFPSVDTPTCATSVRKFNAEAAQLPNTVVL
CISADLPFAQARFCGAEGLNDVMNLSTMRGANFLKDYGVAIAAGPLAGVAARAVVVLDENDKVLHSELVGEIADEPNYAA
ALAVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 3e-20 45
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 2e-20 45
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 4e-20 45
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 3e-20 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pmen_2432 YP_001187920.1 thiol peroxidase VFG0087 Protein 1e-20 45