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Name : Pmen_2384 (Pmen_2384) Accession : YP_001187872.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2630393 - 2631673 bp Length : 1281 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTCGATTCCAAACTCGTCCGCACGCAACTCACCGAAATCGCCGAGCGCCTCGCTACCCGTGGCTTCGCCCTCGACGT CGCCCGCTTCGAGGCCCTGGAGAGTCAGCGCAAGTCGGTGCAGGTGCGCACCGAGCAACTGCAGGCCGAGCGCAACAGCC GTTCCAAGTCGATCGGTCAGGCCAAGGCGCGCGGCGAAGACATCGCGCCGCTGCTGGCGGAAGTCGACCAGATGGGCAGC GACCTGGAAGCCGGCAAGCGTGAGCTGGACGCCATCCAGAACGAGCTGGACAACCTGCTGTTGAACATCCCCAACCTGCC GCACGAGTCCGTGCCGGTCGGCGCGGATGAGGACGGCAACGTCGAGGTGGCGCGCTGGGGCACCCCGCGCAGCTTCGATT TCGAAATCAAGGATCACGTCGCCCTCGGCGAGCAGCACGGCTGGCTGGACTTCGAGACCGCCGCCAAACTGTCTGGCGCG CGTTTCGCTCTGCTGCGCGGCCCCATCGCGCGCCTGCATCGCGCCCTGGCGCAGTTCATGATCAACCTGCACACCGGCGA ACACGGCTACGAAGAGGCTTACACGCCTTATCTGGTACAGGCCCCGGCACTGCAGGGCACCGGCCAGCTGCCGAAGTTCG AGGAAGACCTGTTCAAGATTCGTCGTGAAGACCAGGCCGATCTGTATCTGATCCCGACTGCCGAAGTCTCGCTGACCAAT ATCGTCGCCGGTGAAATTCTCGATGCCAAGCAGCTGCCGCTGAAGTTCGTCGCCCATACCCCGTGCTTCCGCAGCGAGGC GGGCGCCTCCGGCCGCGACACCCGCGGCATGATCCGCCAGCACCAGTTCGACAAGGTGGAGATGGTGCAGATCGTCGAGC CGTCCAAGTCCTTCGAGGCGCTGGAAGGCATGACCGCCCACGCCGAGCGCGTGCTGCAACTGCTCGAGCTGCCGTACCGC AAGCTGGCGCTGTGCACTGGTGACATGGGCTTTTCCGCAGTGAAGACCTACGACCTGGAAGTCTGGGTGCCGAGCCAGGA CAAGTACCGCGAGATTTCCTCCTGCTCCAACTGTGGCGACTTCCAGGCGCGCCGCATGCAGGCGCGCTACCGCAACCCGG AAACCGGCAAGCCGGAACTGGTGCACACCCTCAACGGCTCCGGCCTGGCGGTAGGGCGTACCCTGGTGGCCGTGCTGGAG AACTACCAGCAGGCCGACGGCAGCATCCGCGTGCCCGAGGTGCTCAAGCCCTATATGGGCGGTATCGAGGTGATCGGCTA A Protein sequence : MLDSKLVRTQLTEIAERLATRGFALDVARFEALESQRKSVQVRTEQLQAERNSRSKSIGQAKARGEDIAPLLAEVDQMGS DLEAGKRELDAIQNELDNLLLNIPNLPHESVPVGADEDGNVEVARWGTPRSFDFEIKDHVALGEQHGWLDFETAAKLSGA RFALLRGPIARLHRALAQFMINLHTGEHGYEEAYTPYLVQAPALQGTGQLPKFEEDLFKIRREDQADLYLIPTAEVSLTN IVAGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVEPSKSFEALEGMTAHAERVLQLLELPYR KLALCTGDMGFSAVKTYDLEVWVPSQDKYREISSCSNCGDFQARRMQARYRNPETGKPELVHTLNGSGLAVGRTLVAVLE NYQQADGSIRVPEVLKPYMGGIEVIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-105 | 55 |
