Gene Information

Name : Pmen_2375 (Pmen_2375)
Accession : YP_001187863.1
Strain : Pseudomonas mendocina ymp
Genome accession: NC_009439
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2623489 - 2624133 bp
Length : 645 bp
Strand : -
Note : PFAM: regulatory protein, LuxR; response regulator receiver

DNA sequence :
TTGATTAGGGTCCTGGTGGTCGACGATCACGATCTGGTTCGCACGGGCATCACCCGCATGCTGGCTGATATCGATGGTCT
GCAAGTGGTAGGCGAAGCCTGCAGCGGGGAAGAAGCCCTGCTCAAGGTGCGCGAGCTCAAGCCCGATGTCGTTCTGATGG
ACGTCAAGATGCCCGGCATCGGCGGCCTGGAAGCCACCCGCAAGCTGATGCGCAGCCACCCCGACATCAAGGTCGTCGCC
GTGACCGTGTGCGAGGAAGATCCTTTCCCGACGCGTCTGCTGCAGGCAGGTGCTGCCGGCTATCTGACCAAGGGCGCGGC
GCTGGATGAGATGGTCCAGGCCATTCGCCTGGTCTTCGCCGGTCAGCGTTACATCGATCCGCAGATTGCCCAGCAATTGG
CACTGAAGTCCTTCCAGCCGCAGAGCAAAGGCTCGCCGTTCGATCTTCTGTCCGAGCGCGAAATCCAGATCGCGTTGATG
ATCGCCAACTGCCACAAGGTGCAGAACATCTCCGACAAGCTGTGCCTGTCGCCGAAGACGGTCAATACCTATCGCTACCG
CATCTTCGAGAAACTCTCCATTACCAGCGACGTCGAGCTGGCCCTGCTTGCGGTACGCCACGGCATGGTCGACGCCGTCA
GCTGA

Protein sequence :
MIRVLVVDDHDLVRTGITRMLADIDGLQVVGEACSGEEALLKVRELKPDVVLMDVKMPGIGGLEATRKLMRSHPDIKVVA
VTVCEEDPFPTRLLQAGAAGYLTKGAALDEMVQAIRLVFAGQRYIDPQIAQQLALKSFQPQSKGSPFDLLSEREIQIALM
IANCHKVQNISDKLCLSPKTVNTYRYRIFEKLSITSDVELALLAVRHGMVDAVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 6e-51 56
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 6e-51 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pmen_2375 YP_001187863.1 two component LuxR family transcriptional regulator VFG1889 Protein 9e-51 55