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Name : Pmen_2370 (Pmen_2370) Accession : YP_001187860.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Virulence Product : ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2617040 - 2619883 bp Length : 2844 bp Strand : - Note : PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase DNA sequence : ATGGCCAGGAAGCAATGTCAAATCTGCGGCCAACCCGCCACGGCGCGGGTGGAAGCCAATCTCAATGGTCGCCTCACCAC CATGCTGTTGTGTGACGATCACTACCGCCAACTGGTGCGCCAGCAAAAACGCGCCATTTCCCCGCTGGAAGCCCTTTTCG GCTCGCGCAGCGGCCTGTTCGAAGATTTTCTCGGCAGCGATTTCTTTCGCACCGGAGAGGAGTCGGCACCGGCTGCAGCC GATGCCGATGAAATGGACGATGCGCCGTTTGGCGAACCAGCCTCCACAGCGTCGGGCACGCCGCGCCGTCGCGGTAGCGG GTTGGCCAGCCGCATCAGCGAGCACTCCGAGGCGCTGTTGCAGGAAGCCGCCAAGCATGCCGCGGACTTCGGTCGCTCCG AAGTCGATACGGAACACCTGCTGCTGGCGCTGGCCGACAGCGATGTGATCAAGACCATCCTGAGCCAGTTCAAGATCAAG GTCGATGACCTCAAACGTCAGATCGAAGCCGAAGCCAAGCGTGGCGACAAGCCGTTCGAAGGCGAGATCGGCGTGTCGCC ACGGGTGAAGGATGCGCTCAGTCGCGCCTTCGTCGCCTCCAATGAATTAGGACACTCCTACGTCGGGCCCGAGCACTTCC TGATCGGTCTGGCCGAAGAGGGCGAAGGGCTGGCCGCCAACTTGCTGCGCCGCTATGGCCTCACGCCGCAGGCCCTGCGT CAGCAGGTAAACAAGGTGGTCGGCAAAGGTGCGGAGGATGGCCGCGCCGAGACGCCGACCAATACGCCGGAGCTCGACAA GTATTCGCGCGATCTCACCAAGATGGCCCATGCGGGCAAGCTGGATCCGGTCATCGGCCGCGCGCAGGAAATCGAAACCA CCATCGAGGTGCTGGCGCGGCGCAAGAAGAACAACCCCGTACTGATCGGTGAGCCTGGCGTGGGCAAGACCGCCATCGTC GAAGGGCTGGCACAGCGCATGGTGGCCGGCGAGGTACCCGAGACGCTGCGCGACAAGCGCCTGGTGGAGCTGAACATCAA TTCCATGGTGGCCGGCGCGAAGTACCGTGGCGAGTTCGAGGAACGCGTGCAGAAGGTGCTGAAGGAGATCGCCGAGCACC AGGGCGAGATGATCCTCTTCATCGACGAGGTGCACACCATCGTGGGTGCCGGCCAGGGCGGTGGCGAAGGCGGGTTGGAC GTGGCCAACGTCTTCAAGCCGATGATGGCGCGTGGTGAGCTGAACCTGATCGGCGCGACGACGCTCAACGAGTACCAGAA GTACATCGAGAAGGACGCCGCGCTGGAGCGGCGCTTCCAGCCGGTCATGGTGCCCGAGCCAACGGTGGCGCAGACCATCA TGATCCTGCGCGGCCTGCGCGATACCTTCGAAGCGCACCACAAGGTCAGCATCACCGAGGACGCGATCATCGCGGCCGCC GAGCTGTCCGATCGCTACGTCACCGCGCGCTTTTTGCCGGACAAGGCCATCGATCTGCTCGATCAGGCTGCCGCCCGTGT GAAGCTGTCGGCGACGGCCCGCCCCGTTGCGGTGCAGGAGTTGGAGGCCGAGCTGCACCAGTTGCGCCGGGAGCAGGACT ACCTGGCCTCCCGCAAGCAATACGACAATGCAGCGGAGGTCGGTAAACGCATCGAAAGCAAGGAAGCCGAACTCAAGACG CAGGTCGAGGACTGGGAACGCGAGCGCGGCTCGGGCAGCGCCGAAGTCAAGGCGGAGCACGTGGCGCAGATCGTCTCGCG CCTGACCGGCATCCCGGTCAATGAGCTGACGGTGGAGGAGCGCGAGAAGCTGCTGCACCTGGAGCAGCGGCTGCACGAGC GCCTGGTGGGGCAGGACGAGGCGGTACGGGCGGTAGCGGATGCGGTGCGGCTGTCGCGCGCGGGTCTGCGCGAAGGCAGC AAGCCCGTGGCCACGTTCCTGTTCCTGGGTCCCACCGGTGTCGGCAAGACCGAACTCGCCAAGGCGCTGGCCGAATCCGT CTACGGCAGCGAGGGCGCCCTGTTGCGCATCGACATGTCGGAGTACGGCGAGCGCCATACCGTGGCGCGGCTGGTGGGCG CTCCGCCGGGCTACGTCGGCTATGACGAAGGCGGCCAGCTCACGGAGAAGGTCCGTCGCAAGCCCTACAGCGTGCTGCTG CTCGACGAGATCGAGAAGGCCCACCCCGACGTCTACAACATCCTGCTGCAGGTGTTCGACGACGGGCGGCTCACCGACGG CAAGGGGCGCGTGGTGGACTTCACCAACACCATCATCATTGCCACCTCCAACCTGGGATCCGACATCATTCAGCGCCGGC TGAAGGCGCGCGGAGCTGCCGGCGAGGAGTACGAGAAGACTAAGGCAGAGGTGATGGACGTGCTGCGCGGGCACTTCCGC CCCGAGTTCCTCAACCGCATCGACGAGCTCATCGTCTTCCATGCGTTGGGCAGGGAGGAGATTCGCCACATCGTCGGCCT GCAACTCGATCGCGTGGTCCGCAGTGCCGCAAGCCAGGGGGTGACGCTGACGTTCGATGGGACGCTGGTCGATCACTTCG CGGAAGAAGGCTACAAGCCCGAATTCGGCGCTCGCGAGCTCAAGCGACTGATTCGCAGCGAGCTGGAAACGGCACTGGCG CGCGAGATGCTCGGCGGTGGCATCGGCAAGGGCGATCACGCCCATGCACGTTGGGACGACAAGGCGGAGCGGGTCGCGTT CGACCGCAAGCAACCCGCTCCGACCAGCGCCGAAGCACCCTCTGGATCTGCGCAACCGCCGGGCCCGCACAGGGAGTCGA GCAAGGGAACGCGCAAGAAGAAGTCCGAAAGTGGCAAGGCATGA Protein sequence : MARKQCQICGQPATARVEANLNGRLTTMLLCDDHYRQLVRQQKRAISPLEALFGSRSGLFEDFLGSDFFRTGEESAPAAA DADEMDDAPFGEPASTASGTPRRRGSGLASRISEHSEALLQEAAKHAADFGRSEVDTEHLLLALADSDVIKTILSQFKIK VDDLKRQIEAEAKRGDKPFEGEIGVSPRVKDALSRAFVASNELGHSYVGPEHFLIGLAEEGEGLAANLLRRYGLTPQALR QQVNKVVGKGAEDGRAETPTNTPELDKYSRDLTKMAHAGKLDPVIGRAQEIETTIEVLARRKKNNPVLIGEPGVGKTAIV EGLAQRMVAGEVPETLRDKRLVELNINSMVAGAKYRGEFEERVQKVLKEIAEHQGEMILFIDEVHTIVGAGQGGGEGGLD VANVFKPMMARGELNLIGATTLNEYQKYIEKDAALERRFQPVMVPEPTVAQTIMILRGLRDTFEAHHKVSITEDAIIAAA ELSDRYVTARFLPDKAIDLLDQAAARVKLSATARPVAVQELEAELHQLRREQDYLASRKQYDNAAEVGKRIESKEAELKT QVEDWERERGSGSAEVKAEHVAQIVSRLTGIPVNELTVEEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGS KPVATFLFLGPTGVGKTELAKALAESVYGSEGALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYSVLL LDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQRRLKARGAAGEEYEKTKAEVMDVLRGHFR PEFLNRIDELIVFHALGREEIRHIVGLQLDRVVRSAASQGVTLTFDGTLVDHFAEEGYKPEFGARELKRLIRSELETALA REMLGGGIGKGDHAHARWDDKAERVAFDRKQPAPTSAEAPSGSAQPPGPHRESSKGTRKKKSESGKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-164 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pmen_2370 | YP_001187860.1 | ATPase | VFG0079 | Protein | 6e-175 | 50 |
