Gene Information

Name : Pmen_0024 (Pmen_0024)
Accession : YP_001185531.1
Strain : Pseudomonas mendocina ymp
Genome accession: NC_009439
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 25620 - 26045 bp
Length : 426 bp
Strand : -
Note : -

DNA sequence :
ATGGAATTCAGTGAATTCTCCGACGTCATCGCCCAATGGTGCGAGGCGTCCGCACTGCCACTCGACTGCTGGATCGACGA
TGCCAACGCGCGCCTTGCCGAGATGGGCGGCGGCGTCAGATGCAGCCTGGAAGTGCTCAATCCCTTCGAAGCCAGCGACC
AACAACGATTGCAGGCGGTGCTGAGCCAGGGCGGTGCCGGCCTGGCCTGTGCCTGCGATGGTGCATTCGCCATCGACCCC
GACACCCACGCACTCGTCCTGGTGAACTGGCATCGCGCACCCTGCTCCGTGGATCAGCTGCTGGCCAGCCTGGAAAGGCT
GGCCAACCAGCGGGCTGCCCTGATCAGCCTGCTCCACGTATCCATACGCGAGGCGGCGCTCATCGCACCGCAACCGTCCT
TCAACGCACTGCATCCGGGAGTGTGA

Protein sequence :
MEFSEFSDVIAQWCEASALPLDCWIDDANARLAEMGGGVRCSLEVLNPFEASDQQRLQAVLSQGGAGLACACDGAFAIDP
DTHALVLVNWHRAPCSVDQLLASLERLANQRAALISLLHVSIREAALIAPQPSFNALHPGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpG NP_791215.1 type III secretion protein HrpG Virulence Hrp PAI Protein 1e-29 57
hrpG AAT96207.1 HrpG Virulence T-PAI Protein 1e-28 57
hrpG AAB05084.2 HrpG Virulence Hrp PAI Protein 1e-27 56
hrpG AAC34755.1 HrpG Virulence Hrp PAI Protein 1e-29 56
hrpG AAT96153.1 HrpG Virulence T-PAI Protein 1e-28 56
hrpG AAC35805.1 HrpG Virulence Hrp PAI Protein 8e-30 56