Gene Information

Name : Pmen_2329 (Pmen_2329)
Accession : YP_001187819.1
Strain : Pseudomonas mendocina ymp
Genome accession: NC_009439
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3519
EC number : -
Position : 2568739 - 2570598 bp
Length : 1860 bp
Strand : +
Note : PFAM: protein of unknown function DUF879

DNA sequence :
ATGAACCCGCGCCTGCTCGACTATTACAACCAGGAGCTGCAGCACATCCGCGAAAGCGCGGCGGAGTTCGCCGCCGAGTT
CCCCAAGATCGCCAGTCGCCTGACGCTGTCCGGCATCGATTGCGCCGACCCCTATGTCGAAAGACTGCTGGAGGGTTTCG
CCTACCTCACCGCCCGTGTCCATCTGAAACTGGACGCCGAATACCCCACATTCACCCATAACCTGCTGGAAATCGCCTAC
CCCCACTACCTGGCGCCGACACCGTCGGTGACCGTGGTGCAGCTGTGCGCCGACCCGGACGAAGGCTCGCTGGCCAGTGG
CTTCCGGATCGAGCGCGGCGCTGCGCTGCGAGGCCAGCTGGGGCACGAGGAACAGACCGCCTGCGAATACCGCACCAGCC
ATGACGTGACGCTGTGGCCGCTGGAAGTCAGCCGCGCCGAGTACTTCGGCAACCCGGCCACCGCCCTGGGCCGCCTGGCC
GCGGCAGAACCCAGGGCCAAGGCCGGCCTGCGCATTCGTCTCAAATGTGGCGCCGGCATGCCCTTCAAGGCCCTGGCGCT
GGACAGCCTGCCACTGTTTCTCGCCGGGGCGGACGAGCAGCCGTTTCGCCTGTATGAGCAACTGCTGGGCAATGCCTGCG
CCCTGTTCATCAAGAGCGTCGACGGCGAATGGGCCGAGCGCCTGCCGCTGAGCTGCATCCAGGCACGCGGCTTCGACGAC
AAGGATGCGGTGCTGCCTGTTGTGCCGCGCGCCTTCCAGGGCTACCGCCTGTTGCAGGAGTACTTCGCCCTGCCCAACCG
CTTCCTGTTCGTCGAGTTCAGCGGTCTGCTGCGCGGCGTGGCTCGTTGCGCGGCCCAGGAGCTGGAACTGGTGGTGCTGT
TCAACCGCCTCGATACCAGCCTGGAAGGCTCGGTATCGGCCGCGCAGTTCGTGCCCTTCTGCACCCCGGCGATCAACCTG
TTTCCCCGTCGCGCCGACCGCATCCACTTGAGCGATCACGTGCATGAATATCAGGTCATCGCCGACCGCACCCGCCCGCT
GGACTTCGAGGTGCACTCGCTGACCCAGGTCAGCGGCCACGGCAGCGGCCCCGAGCAACCCTTCCAGCCGTTCTACGCCA
TCCGTGACCCGGCCCGCTATGGCCGCGAGCAGGCCTATTACGTGGTGCGCCGCGAGGCACGCCGGCTGTCCAGCCAGGCG
CGGCGGCGCGGGCCGCGTTCCACCTACGTGGGCAGCGAAACCTTCGTTTCGCTGGTGGACGTCAACCAGGCGCCGTATCG
ACATGACCTGCGCCAGCTGGGCATTGGCGCCCTGTGCACCAACCGCGACCTGCCGCTGCTGATGCCGGTGGGCACCGGCA
AGAGCGATTTCACCCTGGAGGACAGCGCCCCGGTGCAGGCCGTTCGCTGCCTGGCCGGGCCCAGCCGCCCCCGCGCCAGC
CGCGCCCACGATGCCAGCGCCTGGCGCCTGATCAGCCAGCTGTCGCTCAACTACCTGTCGCTCAGCGAACGCGGCCAGGG
CGCTGCAGCCCTGCGCGAGTTGCTGCGCCTGTACGGCGATCCGTCCGATTCGGCGTTGCAGCTGCAAATCGAGGGCCTAC
GCGAAGTGCGCAGCGCCCCCTGCACGCGGCGTCTGCCGATGCCGGGGCCGATCGTCTTCGGTCGCGGCCTGGAGATCAGC
CTGGAGTTCGACGAGAACGCCTTCCGCGGTACCGGCGTGTACCTGCTTGGCGCGGTGTTCGAGCGTTTTCTCGCGCGCTA
TGTGTCGATCAACAGCTTTACCGAAACGGTGCTGCGCACCACCGAACGTGGAGAGATCATGCGATGGCAGGCACAGCCGG
GTCGCCGCCCGAACCTCTAG

Protein sequence :
MNPRLLDYYNQELQHIRESAAEFAAEFPKIASRLTLSGIDCADPYVERLLEGFAYLTARVHLKLDAEYPTFTHNLLEIAY
PHYLAPTPSVTVVQLCADPDEGSLASGFRIERGAALRGQLGHEEQTACEYRTSHDVTLWPLEVSRAEYFGNPATALGRLA
AAEPRAKAGLRIRLKCGAGMPFKALALDSLPLFLAGADEQPFRLYEQLLGNACALFIKSVDGEWAERLPLSCIQARGFDD
KDAVLPVVPRAFQGYRLLQEYFALPNRFLFVEFSGLLRGVARCAAQELELVVLFNRLDTSLEGSVSAAQFVPFCTPAINL
FPRRADRIHLSDHVHEYQVIADRTRPLDFEVHSLTQVSGHGSGPEQPFQPFYAIRDPARYGREQAYYVVRREARRLSSQA
RRRGPRSTYVGSETFVSLVDVNQAPYRHDLRQLGIGALCTNRDLPLLMPVGTGKSDFTLEDSAPVQAVRCLAGPSRPRAS
RAHDASAWRLISQLSLNYLSLSERGQGAAALRELLRLYGDPSDSALQLQIEGLREVRSAPCTRRLPMPGPIVFGRGLEIS
LEFDENAFRGTGVYLLGAVFERFLARYVSINSFTETVLRTTERGEIMRWQAQPGRRPNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0289 NP_454871.1 hypothetical protein Not tested SPI-6 Protein 2e-117 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pmen_2329 YP_001187819.1 hypothetical protein VFG2074 Protein 0.0 84